PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g667410.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 209aa MW: 23686.4 Da PI: 6.0835 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 25.2 | 2.9e-08 | 95 | 142 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN+++ L+ l+P + k + a +L ++ Y++sLq Pd.00g667410.m01 95 SHSLAERVRREKINERLRCLQNLVPGC----YKTMGMAVMLDVVISYVQSLQ 142 8*************************8....355888999999999999998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MELIDNLCEL ENLSANHHEI MALSNGMSFS DHQRQTNQLP LNFIHDNIQS FSHSDDPNHD 60 PLGGRKRKRN NIDKDGEKLK EVIHVRAKRG QATDSHSLAE RVRREKINER LRCLQNLVPG 120 CYKTMGMAVM LDVVISYVQS LQNQIEFLSM KLSAASVYYD FNSPGVDALD TMQQQGTNNA 180 YGEVQEEMVR SEGYGGGLSN YNNNSTWPI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25330.1 | 5e-51 | bHLH family protein |