PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g666670.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 275aa    MW: 30397.5 Da    PI: 6.8656
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g666670.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.31.5e-14115161354
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       ++h+e+ErrRR+riN+ +++Lr+llP+      +K +Ka+ L ++++++k+L
  Pd.00g666670.m01 115 KSHSEAERRRRERINNHLAKLRSLLPST-----TKTDKASLLAEVIQHVKEL 161
                       79*************************9.....8****************99 PP

Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MEIANSMEER GDLTEPWTLP PIHSFNPSAH DQFLLPTPPP PIPSSSSYAS FFNRRAPLQF  60
TYDGSASEHH HHLRILSETL GPMVQPGSAP FGLQAELGKL TAQEIMDAKA LAASKSHSEA  120
ERRRRERINN HLAKLRSLLP STTKTDKASL LAEVIQHVKE LKRQTSLIAE TSPVPTEMDE  180
LIVDDASDED GKFVIKASLC CEDRSDLLPD LIKTLKALRL RTLKAEITTL GGRVKNVLSI  240
EEALKAVMEK TGGEHEQSSS GSVKRQRTNN INILN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1121126ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.17e-91bHLH family protein