PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g665670.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 1048aa MW: 116676 Da PI: 4.3762

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g665670.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.7	3.7e-12	351	392	8	54
HHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 +Er+RR+++N+++ +Lr+l+P+ + K++Ka+iL A++Y+k+L Pd.00g665670.m01 351 AERKRRKKLNERLYRLRSLVPNiS------KMDKAAILGDAIDYVKDL 392 7*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1048 aa Download sequence
MQNLTERLRP LVGLKGWDYC VIWKLSENQR FIELMDCCCS GADENTQTNG GQELLFPVYP 60 VLPCRDTMQH SRTNSCDVLA HLPSSLSLDS GIYAHPLISN QPIWLNSSSN RDSSAMAERD 120 GTRVLVPSAG GLIELFVSKD VSEDQQVIDY ITAQCNISKE QDTLLGAGCN TSFPVNINDM 180 STEIQPHVFP GNENEGNDNL NSNHFQQPPV VSSSVDHDSN VPYDISVDRI RLCSASPMNF 240 LQHVTYNPEN SMKNGNSNVY YEQRSHESLG GMGLQADADA SNMHNSMHVM EALENMEQQG 300 VEDQDSVKHE AQGGRTADNS GSDCSDQIDD EDDTKYRRRT GKGPQSKNLF AERKRRKKLN 360 ERLYRLRSLV PNISKMDKAA ILGDAIDYVK DLLRQVKELQ DELEQHSNDE GPNTKTSANI 420 CGNHNNFQPE ILNQNGTSIT NEPENDDKPP NGFHVGTAGD IGNISKQQQD SDSTNDRGQQ 480 MEPQVGVTQL DGNELFVTVF CEHKPGGFVR LMEALDTLGL EVTNANVTSF RSLVSNVLKV 540 EKKDSEVVQA DDVRDSLLEI TRNPSSKVWP EMAKAKAKAS ENGSGMNIMM IMPSLIQRLR 600 SLVGLKGWDY CVIWKLSEDQ RFIEWMDCCC SGTEITQYDA GQDLLFPPVL PCRDTMLQHP 660 RTTACDLLAK MPSSLPLDSG FVPIYMETDG TKVLIPIPGG LIELLVTKQV FEDQHVIDFI 720 TAQYSISMEQ DTLDNITGTS IMSEIESKNL LDNGNDQMDI NNVLFQATLS SRICSKLDNL 780 NPPYDVSMGT ISNSPIKFLQ QFTNYNSGNR TKNSIDVSYG DASHEPFLSD KQMDPFICSA 840 ENGFQEMEAM QRSMMGDETQ QHMHMQYMEA LAPDMDQQDG NDKQDSIIHD EGPAADGLAS 900 ILGDAIEYVQ ELQKQAKQLQ DELDDHADDE GPKNSGITGH HNNIQSEIQS ELDPGGPKTD 960 HQHDSISKQS QDSDVIHDHK TQQMEPQVEV AQLDGNQFFV KVFCEHKPGG FVRLMEALSS 1020 LSLEVINANV TSFRCLVSNV FIVEVSFF

Sequence ? help Back to Top

Protein Sequence Length: 1048 aa Download sequence

MQNLTERLRP LVGLKGWDYC VIWKLSENQR FIELMDCCCS GADENTQTNG GQELLFPVYP  60
VLPCRDTMQH SRTNSCDVLA HLPSSLSLDS GIYAHPLISN QPIWLNSSSN RDSSAMAERD  120
GTRVLVPSAG GLIELFVSKD VSEDQQVIDY ITAQCNISKE QDTLLGAGCN TSFPVNINDM  180
STEIQPHVFP GNENEGNDNL NSNHFQQPPV VSSSVDHDSN VPYDISVDRI RLCSASPMNF  240
LQHVTYNPEN SMKNGNSNVY YEQRSHESLG GMGLQADADA SNMHNSMHVM EALENMEQQG  300
VEDQDSVKHE AQGGRTADNS GSDCSDQIDD EDDTKYRRRT GKGPQSKNLF AERKRRKKLN  360
ERLYRLRSLV PNISKMDKAA ILGDAIDYVK DLLRQVKELQ DELEQHSNDE GPNTKTSANI  420
CGNHNNFQPE ILNQNGTSIT NEPENDDKPP NGFHVGTAGD IGNISKQQQD SDSTNDRGQQ  480
MEPQVGVTQL DGNELFVTVF CEHKPGGFVR LMEALDTLGL EVTNANVTSF RSLVSNVLKV  540
EKKDSEVVQA DDVRDSLLEI TRNPSSKVWP EMAKAKAKAS ENGSGMNIMM IMPSLIQRLR  600
SLVGLKGWDY CVIWKLSEDQ RFIEWMDCCC SGTEITQYDA GQDLLFPPVL PCRDTMLQHP  660
RTTACDLLAK MPSSLPLDSG FVPIYMETDG TKVLIPIPGG LIELLVTKQV FEDQHVIDFI  720
TAQYSISMEQ DTLDNITGTS IMSEIESKNL LDNGNDQMDI NNVLFQATLS SRICSKLDNL  780
NPPYDVSMGT ISNSPIKFLQ QFTNYNSGNR TKNSIDVSYG DASHEPFLSD KQMDPFICSA  840
ENGFQEMEAM QRSMMGDETQ QHMHMQYMEA LAPDMDQQDG NDKQDSIIHD EGPAADGLAS  900
ILGDAIEYVQ ELQKQAKQLQ DELDDHADDE GPKNSGITGH HNNIQSEIQS ELDPGGPKTD  960
HQHDSISKQS QDSDVIHDHK TQQMEPQVEV AQLDGNQFFV KVFCEHKPGG FVRLMEALSS  1020
LSLEVINANV TSFRCLVSNV FIVEVSFF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	337	358	RRRTGKGPQSKNLFAERKRRKK
2	352	359	ERKRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	1e-111	bHLH family protein