PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g664450.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 356aa MW: 39933.2 Da PI: 5.7179 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 87.7 | 9.8e-28 | 130 | 190 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK++ g+++prsYYrCt++ +C ++k+v+rs+edp+v+eitY+g+H+++ Pd.00g664450.m01 130 EDGHSWRKYGQKDILGTKHPRSYYRCTYRntqSCYATKQVQRSDEDPTVFEITYKGKHTCS 190 8***************************98889**************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 356 aa Download sequence |
MDSSKSWEHK SLLTEIMEGM ELAKQLRLSL SAASSSDTRQ FLVQRILSSY EKALLILNFS 60 GPAQSTAGAI ASVPESLVSA NAGPCFDDYN KSPKDHHDLT DVSNKRKIMA KWTDHVMRVS 120 SENGIEGPHE DGHSWRKYGQ KDILGTKHPR SYYRCTYRNT QSCYATKQVQ RSDEDPTVFE 180 ITYKGKHTCS HGSNSVLPPP SPEQQEQKRN KQNNTSHQQQ SQGNQMSFPT NLRVDTKFLE 240 DRENMASPFS FTSTSFGCMM PDDAFLSSML DDNNTFFDNF NHSLLSPAAG ESNYYLMPPS 300 QMRNIAGNEQ LSECGHTEII SANNSSTNSP IPDMDFPLEP VEIEPHFPFD TTGIFS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G11070.1 | 8e-55 | WRKY family protein |