PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g664130.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 332aa    MW: 36806.8 Da    PI: 4.8111
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g664130.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.8e-19116166155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       ++++GVr+++ +g+W+AeIrdp     r  r +lg+++taeeAa  +++a+ +l+g
  Pd.00g664130.m01 116 KKFRGVRQRP-WGKWAAEIRDPL----RrVRLWLGTYDTAEEAAMVYDNAAIQLRG 166
                       59********.**********72....45*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MNPAVKYTQH RSHTKLVANS AAEFESVRPR VVRISVTDGD ATDSSSDDEP AESSFCGRRR  60
VKRFINEITI ESCSRETDAV WRSRTTRTGR KRASPKSGGL ASRRTLKAVA AAPAGKKFRG  120
VRQRPWGKWA AEIRDPLRRV RLWLGTYDTA EEAAMVYDNA AIQLRGPDAL TNFAAPPAKS  180
LPDVKPVISS CYNSGDESHN NLCSPTSVLR CPSPSNEEAD SPSLKEVPDI AEFRNVRDDS  240
CVSENFSEFS EYTSFESFIP DDIFDFQIPD FLEETSLREV GILKEDFGDL GNFGDILVDS  300
VRDFGFGSSA WCVDDHFQDI GDLFSSDPLV AL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.15e-45ERF family protein