PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g662520.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ERF

Protein Properties

Length: 488aa MW: 53105.3 Da PI: 6.7479

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g662520.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47.3	5e-15	272	323	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g Pd.00g662520.m01 272 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 323 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MNESTTPLTF VPSTKRQLPL DHKSEGCGVG ESFLLWLSGI PGIKFFLCQL QTETATLVSR 60 LGFKYSDDIS GTDVSGGCFD LTSHDDSSAT TTAAAVPNNL SHNHLIPPPF GMLHQAAAFN 120 TTNIHSQGAD WSNMNSSDSS TYKTTSDHLS MLMGSNNSYR SQNLENHHQQ PKLENFLGRH 180 SFVADEHHIG GQSSSSGTHA YNNNSTSSTS TDGQVDMKLI SGITVAGEKD KLAREGKISN 240 YEKEIDEMKH MTRQEYVASL RRKSSGFSRG ASIYRGVTRH HQHGRWQARI GRVAGNKDLY 300 LGTFSTQEEA AEAYDIAAIK FRGLNAVTNF DMTRYDVKSI LDSSTLPICG AAKRLKDVEQ 360 AAQHQHHEMI ISNDHNNGFG DGSNHDHQVK AVALGFENVF GSTTTSANAT NVTGDAYNNH 420 ARNLYYLSQQ PPQSSSVSSV SSAGVAKGGS AYDIHEAGQC NNWMPTAVPT STNSNINMPP 480 TFTVWNDT

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MNESTTPLTF VPSTKRQLPL DHKSEGCGVG ESFLLWLSGI PGIKFFLCQL QTETATLVSR  60
LGFKYSDDIS GTDVSGGCFD LTSHDDSSAT TTAAAVPNNL SHNHLIPPPF GMLHQAAAFN  120
TTNIHSQGAD WSNMNSSDSS TYKTTSDHLS MLMGSNNSYR SQNLENHHQQ PKLENFLGRH  180
SFVADEHHIG GQSSSSGTHA YNNNSTSSTS TDGQVDMKLI SGITVAGEKD KLAREGKISN  240
YEKEIDEMKH MTRQEYVASL RRKSSGFSRG ASIYRGVTRH HQHGRWQARI GRVAGNKDLY  300
LGTFSTQEEA AEAYDIAAIK FRGLNAVTNF DMTRYDVKSI LDSSTLPICG AAKRLKDVEQ  360
AAQHQHHEMI ISNDHNNGFG DGSNHDHQVK AVALGFENVF GSTTTSANAT NVTGDAYNNH  420
ARNLYYLSQQ PPQSSSVSSV SSAGVAKGGS AYDIHEAGQC NNWMPTAVPT STNSNINMPP  480
TFTVWNDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20840.1	2e-64	AP2 family protein