PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g662310.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 1067aa MW: 117767 Da PI: 6.786 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 98.1 | 5.5e-31 | 584 | 641 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES-.-SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYege.Hnhe 59 +DgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers d++++ei+Y+g Hnh Pd.00g662310.m01 584 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSF-DGQITEIIYKGApHNHA 641 7****************************************.**********9669996 PP | |||||||
2 | WRKY | 102.6 | 2.3e-32 | 802 | 860 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver++++ k+v++tYeg+Hnhe Pd.00g662310.m01 802 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASHNLKFVITTYEGKHNHE 860 59********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1067 aa Download sequence |
MTCISLIKQS HTLLSLKTVH ASILRAHLHL NLFLCTNLIA HYASLGSTSH AYTLFSAFSS 60 SSSSSDVFLW NVMIRGFVDN GLYHKAIALY SNMWELGTQP DHFTFPFVLK ACGYVCDDRL 120 GVKLHGDVIQ CGCASDLFVG NSLIGLYGKF GQVETARKVF DKMPDRNVVS WSSMIGAYSQ 180 SGCFKHGWFL FSMMLNESIR PNRAAILNVM ACVSRENQAD EVCGVVAANG LDLDRSVQNA 240 AMQMYARCRR IDVARGFFDK ISDKDLVSWA SMIEAYVQVD LPLEALELFK EMRVQGILPD 300 LVALLSGIIK PTDEESIKMG FLRTMDQEDD AVAENKTKAC GPGANTISIA ERRAAKCGFN 360 AERINTARFR TTSPLPSPAA AASLCFVISW FKLRFVKGLA AELKDNHHNQ EGKRTLWTLI 420 ALPSPTTGTF PLLPPNDNSS VLKSGTHEDG HRGSDFGSSF TFKRQGDPKY LPGYSSFENQ 480 GSTVDYQSLV LEQQPIDFEF PMEFPEEANA KNYAVDPSTH VKNLNSGILN ANCVDLQRSN 540 SSAASEQNSL PKEPIHGEDV GSHPFLEGEH RGSYPSAGMV RTSEDGYNWR KYGQKQVKGS 600 EYPRSYYKCT HPNCQVKKKV ERSFDGQITE IIYKGAPHNH AMPQPNRRAG ASLGSSFSFD 660 ETSEMSEGSR ASVKVEGGSV WTNIQSGKDI KTGYDGRAEG LERTSSTSVV TDLSDPLSTT 720 QGKSMSIFES AETPEFSSTL ASHDDDDRGT QGSISLGDDA DDEESESKRR KKESCLIEPS 780 LASRAVREPR VVVQIESEVD ILDDGYRWRK YGQKVVKGNP NPRSYYKCTS AGCSVRKHVE 840 RASHNLKFVI TTYEGKHNHE VPAARNSNHI NSNGGNAHPS TANAQPALAL PRSSNNPKPE 900 TQVQDLAPHF DRKPDFHEEY LRSSFLGNFN NDLKFGVPSI YQMKYPPLQN TMPYSSFGLH 960 ANHSVTHQAG SVAPDFPISL PLNLPPSGNL PLCGFDFNNG KSVCPVQPYF SGQQLQEDDT 1020 RFLKPKQEQK DDNLYDACLP IIDQANASLS SSSSSLLYQR IMGGYPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56270.1 | 6e-91 | WRKY family protein |