PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g661790.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 575aa MW: 65665.1 Da PI: 7.893

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g661790.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.1	2.3e-14	5	51	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqky 47 +WT+eEd+ll ++++q+G g W++++ gRt++++k++w+ + Pd.00g661790.m01 5 PWTKEEDQLLRKCIEQYGEGKWHRVPLLAArlPGRTGNDVKNYWNCH 51 7********************9976666666*********977 PP

Sequence ? help Back to Top
Protein Sequence Length: 575 aa Download sequence
MGGIPWTKEE DQLLRKCIEQ YGEGKWHRVP LLAARLPGRT GNDVKNYWNC HLSKKLNAQE 60 AEDKNKHCAR NVQVMRPRAS NYASTNSKRP YSTALDQAPS NNFCQPVNLL AQEGGSSSRT 120 QIPTPMPMLC NIGDGQNQMF QAEHDESNKN VPSVEEEDIN DGINMGVSAR FIMAYIPPHK 180 RHSKETEWPL PTPELLAPQF KKKLDLRSSK SNADLDGKVI YANHARSRWC IIGLDDENQF 240 PSSVNLEPIS WETTERRIGE KPLALINTSL DKGSEVKWYF PKSPWVSIAE NVLEDLLSSF 300 ENVKNDMKCP KLEQVKPSLV ARVGKVLFQR SPSVNMESIR NNLDTEILKQ WKRLFYTNLP 360 VSYKENILKK VVPNIGVDFE EEKDVYQVKL SDSTRPDSIL SCKCSVMKEH GKLQLHKIEL 420 NQLRDMVIDI SCPNKNLDLR VMLSTKRPVT ALSDDEMQSI RDLISSAVLD PDVKGGLRWP 480 LGKESSGDRY KVVGIWHVIA NMYTNPSLRL KVRHADRFDF RTSTGEATWE VSLMLKKVLS 540 KLQEEKVEVS SISEILEENM RMIWDNFLCS EHFLI

Sequence ? help Back to Top

Protein Sequence Length: 575 aa Download sequence

MGGIPWTKEE DQLLRKCIEQ YGEGKWHRVP LLAARLPGRT GNDVKNYWNC HLSKKLNAQE  60
AEDKNKHCAR NVQVMRPRAS NYASTNSKRP YSTALDQAPS NNFCQPVNLL AQEGGSSSRT  120
QIPTPMPMLC NIGDGQNQMF QAEHDESNKN VPSVEEEDIN DGINMGVSAR FIMAYIPPHK  180
RHSKETEWPL PTPELLAPQF KKKLDLRSSK SNADLDGKVI YANHARSRWC IIGLDDENQF  240
PSSVNLEPIS WETTERRIGE KPLALINTSL DKGSEVKWYF PKSPWVSIAE NVLEDLLSSF  300
ENVKNDMKCP KLEQVKPSLV ARVGKVLFQR SPSVNMESIR NNLDTEILKQ WKRLFYTNLP  360
VSYKENILKK VVPNIGVDFE EEKDVYQVKL SDSTRPDSIL SCKCSVMKEH GKLQLHKIEL  420
NQLRDMVIDI SCPNKNLDLR VMLSTKRPVT ALSDDEMQSI RDLISSAVLD PDVKGGLRWP  480
LGKESSGDRY KVVGIWHVIA NMYTNPSLRL KVRHADRFDF RTSTGEATWE VSLMLKKVLS  540
KLQEEKVEVS SISEILEENM RMIWDNFLCS EHFLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	2e-17	MYB family protein