PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g661650.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | E2F/DP | ||||||||
Protein Properties | Length: 189aa MW: 21105.8 Da PI: 5.357 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 68.4 | 8.7e-22 | 83 | 151 | 1 | 64 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliekkek 64 r+eksL lltq+f+kl+ +s+e++++l++v++ L+ + +++k+R iYDi+NVL+++nliek++ Pd.00g661650.m01 83 RREKSLALLTQNFVKLFVCSTEEMISLDDVTELLLGDaqsasAMRTKVRGIYDIANVLSSMNLIEKTHT 151 689***************************************************************543 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence |
MSYLFLHQPK NQYYWKGFGA IRNALQELRE EGMRENCINF VASDDAKVSD DKDDEERCGS 60 QLNDKSNPTV NPQPPADQKT DNRREKSLAL LTQNFVKLFV CSTEEMISLD DVTELLLGDA 120 QSASAMRTKV RGIYDIANVL SSMNLIEKTH TADTRKLAFK CFHPVADARI ATRGVTKIVA 180 ATETAGGEQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48160.1 | 7e-48 | E2F/DP family protein |