PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g661270.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 1014aa MW: 113479 Da PI: 4.8552

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g661270.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43	1e-13	8	53	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g W Ede+l+ av ++G+++W++I++ + ++++kqck rw+ +l Pd.00g661270.m01 8 GVWKNTEDEILKAAVMKYGKNQWARISSLLV-RKSAKQCKARWYEWL 53 78***************************.**********986 PP
2	Myb_DNA-binding	32.7	1.7e-10	60	103	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEde+l+++ k++++ W+tIa +g Rt+ qc +r+ k+l Pd.00g661270.m01 60 TEWTREEDEKLLHLAKLMPTQ-WRTIAPIVG--RTPSQCLERYEKLL 103 68***************99.****8..********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1014 aa Download sequence
MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT 60 EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDAACVKD DNYEPGDDPR 120 KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TRGKKAKRKA REKQLEEARR 180 LASLQKRREL KAAGIDTRQR KRKRKGIDYN AEIPFEKKPP PGFYDVADED RPVEQSQFPT 240 TIEELEGKRR IDVEAQLRKQ DIAKNKIAQR QDAPSAILQA NKLNDPETVR KRSKLMLPAP 300 QISDHELEEI AKMGYASDLA GSEELTEGSG ATRALLANYS QTPRLGMTPQ RTPQRTPSGK 360 GDAIMMEAEN LARLRESQTP LLGGDNPELH PSDFSGVTPR KKEIQTPNLM LTPSATPGGA 420 GLTPRIGMTP TRDSFGMTPK GTPIRDELRI NEEIDIHDTA KLEQRRNLQF GLGNLPQPKN 480 EYQIVMQPVP EDNEEPEEKI EEDMSDRLAR ERAEEEARQQ ALLRKRSKVL QRELPRPPAA 540 SLEFIRNSLT RADGDKSSFV PPTSVEQADE MVKKELLSVL EHDNAKYPLT EKVDKRKKKG 600 AKRSAGGPSA SVPVIEEFEE DEMTEADSMI KEEAQYLRVA MGREEESLDE FVEAHKTCLN 660 DLMYLPTRGA YGLSSVAANM EKLAALQNEF ENVKKKMEDD IQKAASIESK VKVRTYGYEM 720 RAKDGLWPKI EETFKQMDTA AKELECFKAL QKQEKLAASH RINNIWEEVQ KQKELERNLQ 780 KRYGDLVVEL ERVQHRMDEY RAQAEKQEEI AAMNCDQELA EATENVTVLQ TTENPDPITA 840 SDELGSTVPG GASNGEATNL QMDGNKDIDA GKDHETVSRD VNLPDNMPSA VEGENDPNSQ 900 LTSSGGIHSS GVAAQDSVSK GDNVSDNLVA TENKMVNDPV DGVISDNMTS SVVAEDQKVE 960 MRQNLTELEG SVQAAGDGGL ANGSTTIVSI EGEVENSAEN AAPNLNVFNV EETA

Sequence ? help Back to Top

Protein Sequence Length: 1014 aa Download sequence

MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT  60
EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDAACVKD DNYEPGDDPR  120
KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TRGKKAKRKA REKQLEEARR  180
LASLQKRREL KAAGIDTRQR KRKRKGIDYN AEIPFEKKPP PGFYDVADED RPVEQSQFPT  240
TIEELEGKRR IDVEAQLRKQ DIAKNKIAQR QDAPSAILQA NKLNDPETVR KRSKLMLPAP  300
QISDHELEEI AKMGYASDLA GSEELTEGSG ATRALLANYS QTPRLGMTPQ RTPQRTPSGK  360
GDAIMMEAEN LARLRESQTP LLGGDNPELH PSDFSGVTPR KKEIQTPNLM LTPSATPGGA  420
GLTPRIGMTP TRDSFGMTPK GTPIRDELRI NEEIDIHDTA KLEQRRNLQF GLGNLPQPKN  480
EYQIVMQPVP EDNEEPEEKI EEDMSDRLAR ERAEEEARQQ ALLRKRSKVL QRELPRPPAA  540
SLEFIRNSLT RADGDKSSFV PPTSVEQADE MVKKELLSVL EHDNAKYPLT EKVDKRKKKG  600
AKRSAGGPSA SVPVIEEFEE DEMTEADSMI KEEAQYLRVA MGREEESLDE FVEAHKTCLN  660
DLMYLPTRGA YGLSSVAANM EKLAALQNEF ENVKKKMEDD IQKAASIESK VKVRTYGYEM  720
RAKDGLWPKI EETFKQMDTA AKELECFKAL QKQEKLAASH RINNIWEEVQ KQKELERNLQ  780
KRYGDLVVEL ERVQHRMDEY RAQAEKQEEI AAMNCDQELA EATENVTVLQ TTENPDPITA  840
SDELGSTVPG GASNGEATNL QMDGNKDIDA GKDHETVSRD VNLPDNMPSA VEGENDPNSQ  900
LTSSGGIHSS GVAAQDSVSK GDNVSDNLVA TENKMVNDPV DGVISDNMTS SVVAEDQKVE  960
MRQNLTELEG SVQAAGDGGL ANGSTTIVSI EGEVENSAEN AAPNLNVFNV EETA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	186	205	KRRELKAAGIDTRQRKRKRK
2	200	205	RKRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09770.1	0.0	MYB family protein