PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g660710.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 302aa MW: 31799.8 Da PI: 5.1812 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.5 | 3.2e-10 | 151 | 195 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h+++Er RR+ri +++ L+el+P++ K + a++L + v+Y+k L Pd.00g660710.m01 151 HSIAERLRRERIAERMKALQELVPSC-----NKTDRAAMLDEIVDYVKFL 195 99***********************8.....6****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 302 aa Download sequence |
MAGNPPEGLG DDFFEQILAV PPSYSTGGAD SAGGGYGDVG SMPMVLQLGS GGSSSAGGGG 60 GYRGVGMGMG MPLGLNLEQG GFIGPERFRE LREEVEANTN NNINTSNVSA SVSSAMNFHS 120 QPSPGPVAAV HHPPAIRPRV RARRGQATDP HSIAERLRRE RIAERMKALQ ELVPSCNKTD 180 RAAMLDEIVD YVKFLRLQVK VLSMSRLGGA GAVAQLVADV PLSAVEGEGI EGGTNQQAWE 240 KWSNDGTEQQ VAKLMEEDVG AAMQFLQSKA LCIMPISLAP AIFRTHQPDA TTLVKPESNS 300 SS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 156 | 161 | RLRRER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G02590.3 | 8e-61 | bHLH family protein |