PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g660710.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 302aa    MW: 31799.8 Da    PI: 5.1812
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g660710.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.53.2e-10151195554
                       HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       h+++Er RR+ri +++  L+el+P++      K + a++L + v+Y+k L
  Pd.00g660710.m01 151 HSIAERLRRERIAERMKALQELVPSC-----NKTDRAAMLDEIVDYVKFL 195
                       99***********************8.....6****************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MAGNPPEGLG DDFFEQILAV PPSYSTGGAD SAGGGYGDVG SMPMVLQLGS GGSSSAGGGG  60
GYRGVGMGMG MPLGLNLEQG GFIGPERFRE LREEVEANTN NNINTSNVSA SVSSAMNFHS  120
QPSPGPVAAV HHPPAIRPRV RARRGQATDP HSIAERLRRE RIAERMKALQ ELVPSCNKTD  180
RAAMLDEIVD YVKFLRLQVK VLSMSRLGGA GAVAQLVADV PLSAVEGEGI EGGTNQQAWE  240
KWSNDGTEQQ VAKLMEEDVG AAMQFLQSKA LCIMPISLAP AIFRTHQPDA TTLVKPESNS  300
SS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1156161RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.38e-61bHLH family protein