PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g659460.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 343aa    MW: 38644.2 Da    PI: 5.3245
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g659460.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.16.4e-13146197155
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +r++h ++Er+RR+++N+ ++ Lr+l+P +   + ++ + a+i   A++++k+L+
  Pd.00g659460.m01 146 QRMTHIAVERNRRKQMNEYLSVLRSLMPDS---YVQRGDQASIIGGAINFVKELE 197
                       79****************************...9******************995 PP

Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MALDAVVFPQ DPFSCATNKD LYSYWSSFDD DHHNFGFDND QDHHDQLQHQ ASLDFLGYQT  60
DHNPPNYGTN YYSSAPLNSM VPHFNELQLS NPNPDVSDTT SPTDDQPEFH QLPLDHTITM  120
ADSMPSARAK RRRAKSRKNK EEIENQRMTH IAVERNRRKQ MNEYLSVLRS LMPDSYVQRG  180
DQASIIGGAI NFVKELEQEV HFLGTQKPNN GVPFSQFFTF PQYSTRSSGD HDSAAAAMAE  240
LPLMECKLSN IAADIEVTMV ESHASLKVRA KRIPKQLLKI VSGLHGMHLT ILHLNVVTAD  300
DVVLYSLSLK VEDECTLASV DEIATAVHQM LATIQEEAML NLN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1147158RMTHIAVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.14e-70bHLH family protein