PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g658980.m04

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 1119aa MW: 124885 Da PI: 9.9383

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g658980.m04	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.3	3.6e-08	44	80	3	41
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqck 41 W++ E e+++da +++G++ W+++a+ + +R+ +++ Pd.00g658980.m04 44 EWSKGELERFYDAYRKYGKD-WRKVAAAVR-NRSIEMVE 80 7***************99.*****.*98875 PP

Sequence ? help Back to Top
Protein Sequence Length: 1119 aa Download sequence
MAPTKKSKSV KRYATVNEAS PEKYGGGSNK KKQRRKLSDK LGPEWSKGEL ERFYDAYRKY 60 GKDWRKVAAA VRNRSIEMVE ALYNMNRAYL SLPEGTASVV GLKAMMTDHY NVMEGSDSER 120 ESNDALGFSR KPQKRKLGKD QLSASKDVFQ SHSNASHEGC LSLLKRRRLD GGQPRAVGKR 180 TPRFPVSYAY KKDDRDTYVS PIKKGRRSEG DNDDEVAHVA ALLTEASQRG GSPQISQTPY 240 RRPVHVKSSS VQSSERMHPP RGKARANLRD PSMDEDWLEG SIGSKGAETG DYARDSLEGV 300 GTVEINWKGK KFYGKKEKAK DIGNHQFDDG GEACSGTEEG LNVSSRGKDD IEVSNTKGER 360 FSPQGQRKRS KKLYFGDESS CLDALQTLAD LSLMMPESTM ESGSSVQLKE EGTNLDVEDK 420 FSVPEATSTS QSRNKNKIPS AKHRVPFAIS GVEGTNSKKS KLGREPAFDT TAVSESEQQL 480 QSTTKTWKRK RKSSVSKISN ADAPIDSNIN EPLKIEAFGE EENKPVTKGK RTNQSSTPSK 540 QWKSTRSLEG SLNSDYRRTG TDLTVTTAQA PTSNHVNLPT KRISRRKMYI PRTLHPKEKS 600 SEKKIKNQLN IRSSSAQDRA LYLKEKTSCC LSSDLVRRWC TFEWFYSALD YPWFAKREFE 660 EYLNHVGLGH IPRLTRVEWG VIRSSLGKPR RFSEHFLHEE REKLKQYRES VRKHYAELRT 720 GDREGLPTDL ARPLSVGQRV IALHPKTREV HDGSVLTVDH DKCRVQFDRP DIGVEFVMDV 780 DCMPLNPLDN MPEALRRQNF AFEKFSLTSK EANKNGNLNF GGPHFEKATS PMNTSVKQGK 840 GDSNHTTSQP KAASADIDRA QAQQSTYSQP GMVVAHNQAR DADIRALSEL TRALDKKVSS 900 ALLNLRQRNT YPANSLPPWL KQPANSTVYG GLPSSFDSSI SQESGSSVAE IVEVSRSKAH 960 MMVNAAIQAM SSRKGGEDAY VRIREALDSI DNQHLPSDSR LSLNRSQEQV NGNLGHRNQL 1020 ISSTSDPNFT SDSPGPKPNT DTEKTEAQVL SDVISACVMA VHMIQTCTER QYPPAVVAQV 1080 LDYAVTSLHP RCPQNVGIYR EIQMCMGRIK TQILALVPT

Sequence ? help Back to Top

Protein Sequence Length: 1119 aa Download sequence

MAPTKKSKSV KRYATVNEAS PEKYGGGSNK KKQRRKLSDK LGPEWSKGEL ERFYDAYRKY  60
GKDWRKVAAA VRNRSIEMVE ALYNMNRAYL SLPEGTASVV GLKAMMTDHY NVMEGSDSER  120
ESNDALGFSR KPQKRKLGKD QLSASKDVFQ SHSNASHEGC LSLLKRRRLD GGQPRAVGKR  180
TPRFPVSYAY KKDDRDTYVS PIKKGRRSEG DNDDEVAHVA ALLTEASQRG GSPQISQTPY  240
RRPVHVKSSS VQSSERMHPP RGKARANLRD PSMDEDWLEG SIGSKGAETG DYARDSLEGV  300
GTVEINWKGK KFYGKKEKAK DIGNHQFDDG GEACSGTEEG LNVSSRGKDD IEVSNTKGER  360
FSPQGQRKRS KKLYFGDESS CLDALQTLAD LSLMMPESTM ESGSSVQLKE EGTNLDVEDK  420
FSVPEATSTS QSRNKNKIPS AKHRVPFAIS GVEGTNSKKS KLGREPAFDT TAVSESEQQL  480
QSTTKTWKRK RKSSVSKISN ADAPIDSNIN EPLKIEAFGE EENKPVTKGK RTNQSSTPSK  540
QWKSTRSLEG SLNSDYRRTG TDLTVTTAQA PTSNHVNLPT KRISRRKMYI PRTLHPKEKS  600
SEKKIKNQLN IRSSSAQDRA LYLKEKTSCC LSSDLVRRWC TFEWFYSALD YPWFAKREFE  660
EYLNHVGLGH IPRLTRVEWG VIRSSLGKPR RFSEHFLHEE REKLKQYRES VRKHYAELRT  720
GDREGLPTDL ARPLSVGQRV IALHPKTREV HDGSVLTVDH DKCRVQFDRP DIGVEFVMDV  780
DCMPLNPLDN MPEALRRQNF AFEKFSLTSK EANKNGNLNF GGPHFEKATS PMNTSVKQGK  840
GDSNHTTSQP KAASADIDRA QAQQSTYSQP GMVVAHNQAR DADIRALSEL TRALDKKVSS  900
ALLNLRQRNT YPANSLPPWL KQPANSTVYG GLPSSFDSSI SQESGSSVAE IVEVSRSKAH  960
MMVNAAIQAM SSRKGGEDAY VRIREALDSI DNQHLPSDSR LSLNRSQEQV NGNLGHRNQL  1020
ISSTSDPNFT SDSPGPKPNT DTEKTEAQVL SDVISACVMA VHMIQTCTER QYPPAVVAQV  1080
LDYAVTSLHP RCPQNVGIYR EIQMCMGRIK TQILALVPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	130	137	RKPQKRKL
2	165	169	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein