PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g658980.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 1156aa MW: 129120 Da PI: 9.8444

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g658980.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.2	3.7e-08	44	80	3	41
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqck 41 W++ E e+++da +++G++ W+++a+ + +R+ +++ Pd.00g658980.m02 44 EWSKGELERFYDAYRKYGKD-WRKVAAAVR-NRSIEMVE 80 7***************99.*****.*98875 PP

Sequence ? help Back to Top
Protein Sequence Length: 1156 aa Download sequence
MAPTKKSKSV KRYATVNEAS PEKYGGGSNK KKQRRKLSDK LGPEWSKGEL ERFYDAYRKY 60 GKDWRKVAAA VRNRSIEMVE ALYNMNRAYL SLPEGTASVV GLKAMMTDHY NVMEGSDSER 120 ESNDALGFSR KPQKRKLGKD QLSASKDVFQ SHSNASHEGC LSLLKRRRLD GGQPRAVGKR 180 TPRFPVSYAY KKDDRDTYVS PIKKGRRSEG DNDDEVAHVA ALLTEASQRG GSPQISQTPY 240 RRPVHVKSSS VQSSERMHPP RGKARANLRD PSMDEDWLEG SIGSKGAETG DYARDSLEGV 300 GTVEINWKGK KFYGKKEKAK DIGNHQFDDG GEACSGTEEG LNVSSRGKDD IEVSNTKGER 360 FSPQGQRKRS KKLYFGDESS CLDALQTLAD LSLMMPESTM ESGSSVQLKE EGTNLDVEDK 420 FSVPEATSTS QSRNKNKIPS AKHRVPFAIS GVEGTNSKKS KLGREPAFDT TAVSESEQQL 480 QSTTKTWKRK RKSSVSKISN ADAPIDSNIN EPLKIEAFGE EENKPVTKGK RTNQSSTPSK 540 QWKSTRSLEG SLNSDYRRTG TDLTVTTAQA PTSNHVNLPT KRISRRKMYI PRTLHPKEKS 600 SEKKIKNQLN IRSSSAQDRA LYLKEKTSCC LSSDLVRRWC TFEWFYSALD YPWFAKREFE 660 EYLNHVGLGH IPRLTRVEWG VIRSSLGKPR RFSEHFLHEE REKLKQYRES VRKHYAELRT 720 GDREGLPTDL ARPLSVGQRV IALHPKTREV HDGSVLTVDH DKCRVQFDRP DIGVEFVMDV 780 DCMPLNPLDN MPEALRRQNF AFEKFSLTSK EANKNGNLNF GGPHFEKATS PMNTSVKQGK 840 GDSNHTTSQP KAASADIDRA QAQQSTYSQP GMVVAHNQAR DADIRALSEL TRALDKKEAL 900 LMELRNTNNN ILENQNSGEC SLKDSEPFKK HYATVSSALL NLRQRNTYPA NSLPPWLKQP 960 ANSTVYGGLP SSFDSSISQE SGSSVAEIVE VSRSKAHMMV NAAIQAMSSR KGGEDAYVRI 1020 REALDSIDNQ HLPSDSRLSL NRSQEQVNGN LGHRNQLISS TSDPNFTSDS PGPKPNTDTE 1080 KTEAQVLSDV ISACVMAVHM IQTCTERQYP PAVVAQVLDY AVTSLHPRCP QNVGIYREIQ 1140 MCMGRIKTQI LALVPT

Sequence ? help Back to Top

Protein Sequence Length: 1156 aa Download sequence

MAPTKKSKSV KRYATVNEAS PEKYGGGSNK KKQRRKLSDK LGPEWSKGEL ERFYDAYRKY  60
GKDWRKVAAA VRNRSIEMVE ALYNMNRAYL SLPEGTASVV GLKAMMTDHY NVMEGSDSER  120
ESNDALGFSR KPQKRKLGKD QLSASKDVFQ SHSNASHEGC LSLLKRRRLD GGQPRAVGKR  180
TPRFPVSYAY KKDDRDTYVS PIKKGRRSEG DNDDEVAHVA ALLTEASQRG GSPQISQTPY  240
RRPVHVKSSS VQSSERMHPP RGKARANLRD PSMDEDWLEG SIGSKGAETG DYARDSLEGV  300
GTVEINWKGK KFYGKKEKAK DIGNHQFDDG GEACSGTEEG LNVSSRGKDD IEVSNTKGER  360
FSPQGQRKRS KKLYFGDESS CLDALQTLAD LSLMMPESTM ESGSSVQLKE EGTNLDVEDK  420
FSVPEATSTS QSRNKNKIPS AKHRVPFAIS GVEGTNSKKS KLGREPAFDT TAVSESEQQL  480
QSTTKTWKRK RKSSVSKISN ADAPIDSNIN EPLKIEAFGE EENKPVTKGK RTNQSSTPSK  540
QWKSTRSLEG SLNSDYRRTG TDLTVTTAQA PTSNHVNLPT KRISRRKMYI PRTLHPKEKS  600
SEKKIKNQLN IRSSSAQDRA LYLKEKTSCC LSSDLVRRWC TFEWFYSALD YPWFAKREFE  660
EYLNHVGLGH IPRLTRVEWG VIRSSLGKPR RFSEHFLHEE REKLKQYRES VRKHYAELRT  720
GDREGLPTDL ARPLSVGQRV IALHPKTREV HDGSVLTVDH DKCRVQFDRP DIGVEFVMDV  780
DCMPLNPLDN MPEALRRQNF AFEKFSLTSK EANKNGNLNF GGPHFEKATS PMNTSVKQGK  840
GDSNHTTSQP KAASADIDRA QAQQSTYSQP GMVVAHNQAR DADIRALSEL TRALDKKEAL  900
LMELRNTNNN ILENQNSGEC SLKDSEPFKK HYATVSSALL NLRQRNTYPA NSLPPWLKQP  960
ANSTVYGGLP SSFDSSISQE SGSSVAEIVE VSRSKAHMMV NAAIQAMSSR KGGEDAYVRI  1020
REALDSIDNQ HLPSDSRLSL NRSQEQVNGN LGHRNQLISS TSDPNFTSDS PGPKPNTDTE  1080
KTEAQVLSDV ISACVMAVHM IQTCTERQYP PAVVAQVLDY AVTSLHPRCP QNVGIYREIQ  1140
MCMGRIKTQI LALVPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	130	137	RKPQKRKL
2	165	169	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein