PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g656430.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 492aa MW: 55036.6 Da PI: 7.1864

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g656430.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.5	1.8e-11	311	357	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr+++P+ K++ ++ L Av YI++L+ Pd.00g656430.m01 311 NHVEAERQRREKLNHRFYVLRSVVPNV-----SKMDRSSLLADAVAYINQLK 357 799*********************6.....5***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 492 aa Download sequence
MEEIIASSSS PQFCQETAAT CQQRLQFIVQ NRPEWWVYAI FWQASKDSND QISLSWAGGH 60 FKSSKDLASK RSNKVMNNYQ PKFGFNNVER KKVINRGCAE SLFQEDLEDL DMRLVDHGVG 120 DVTDSEWFYF YSVSLTQSFA AGHATNNILG RAFCSGGFVW LAGAHELQFY ECERVKEARM 180 HGIQTLVCIA TPCGVLELAS LDVIKEDWGL VHLSKSLFGS DNNRISKQGS RDGNAPVPFP 240 ESGMFSGPQK DFPRQEGDTK EAAPINIGGS SSDSPSDSVG NFASENTERT RLKKRGRSTN 300 HGPGRESQLL NHVEAERQRR EKLNHRFYVL RSVVPNVSKM DRSSLLADAV AYINQLKSKV 360 EELEAKIQSQ PQNPKMGNVS NLDHHSSQST SSTVDFHHSS SNNNNNNNRG AGVVEVDVKI 420 LGSEAMIRVQ CPDQDYPYAK LMNALKSLGL QVYHASISSV KEMMIQDIVA RVPYGFTSEE 480 AMRMGIIKRW YN

Sequence ? help Back to Top

Protein Sequence Length: 492 aa Download sequence

MEEIIASSSS PQFCQETAAT CQQRLQFIVQ NRPEWWVYAI FWQASKDSND QISLSWAGGH  60
FKSSKDLASK RSNKVMNNYQ PKFGFNNVER KKVINRGCAE SLFQEDLEDL DMRLVDHGVG  120
DVTDSEWFYF YSVSLTQSFA AGHATNNILG RAFCSGGFVW LAGAHELQFY ECERVKEARM  180
HGIQTLVCIA TPCGVLELAS LDVIKEDWGL VHLSKSLFGS DNNRISKQGS RDGNAPVPFP  240
ESGMFSGPQK DFPRQEGDTK EAAPINIGGS SSDSPSDSVG NFASENTERT RLKKRGRSTN  300
HGPGRESQLL NHVEAERQRR EKLNHRFYVL RSVVPNVSKM DRSSLLADAV AYINQLKSKV  360
EELEAKIQSQ PQNPKMGNVS NLDHHSSQST SSTVDFHHSS SNNNNNNNRG AGVVEVDVKI  420
LGSEAMIRVQ CPDQDYPYAK LMNALKSLGL QVYHASISSV KEMMIQDIVA RVPYGFTSEE  480
AMRMGIIKRW YN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	292	298	LKKRGRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	3e-66	bHLH family protein