PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g654510.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 1157aa MW: 129247 Da PI: 9.8932

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g654510.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.5	6.3e-08	45	80	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W++ E e+++da +++G++ W+++a+ + +R+ +++ Pd.00g654510.m01 45 EWSKGELERFYDAYRKYGKD-WRKVAAAVR-NRSIEMV 80 7***************99.*****.98765 PP

Sequence ? help Back to Top
Protein Sequence Length: 1157 aa Download sequence
MAPTKKSKSV KRYATVNEAS PEKYGGGSNK KKQRKRKLSD KLGPEWSKGE LERFYDAYRK 60 YGKDWRKVAA AVRNRSIEMV DALYNMNRAY LSLPEGTASV VGLKAMMTDH YNVMEGSDSE 120 RESNDALGFS RKPQKRKLGK DQLSASKDVF QSHSNASHEG CLSLLKRRRL DGGQPRAVGK 180 RTPRFPVSYA YKKDDRDTYV SPIKKGRRSE GNNDDEVAHV AALLTEASQR GGSPQISQTP 240 YRRPVHVKSS SVQSSERMHP PRGKARANLR DPSMEEDWLE GSIGSKGAET GDYARDSLEG 300 VGTVEINWKG KKFYGKKEKA KDIGNHQFDD GGEACSGTEE GLNVSSRGKD DIEVSNTKGE 360 RFSPQGQRKR SKKLYFGDES SCLDALQTLA DLSLMMPEST MESGSSVQLK EEGTNLDVED 420 KFSVPEATST SQSRNKNKIP SAKHRVPFAI SGVEGTNSKK SKLGREPAFD TTAVSESEQQ 480 LQSTTKTWKR KRKSSVSKIS NADAPIDSNI NEPLKIEAFG EEENKPVTKG KRTNQSSTPS 540 KQWKSTRSLE GSLNSDYRRT GTDLTVTTAQ APTSNHVNLP TKRISRRKMY IPRTLHPKEK 600 SSEKKLKNQL NIRSSSAQDR ALYLKEKTSC CLSSDLVRRW CTFEWFYSAL DYPWFAKREF 660 EEYLNHVGLG HIPRLTRVEW GVIRSSLGKP RRFSEHFLHE EREKLKQYRE SVRKHYAELR 720 TGDREGLPTD LARPLSVGQR VIALHPKTRE VHDGSVLTVD HDKCRVQFDR PDIGVEFVMD 780 VDCMPLNPLD NMPEALRRQN FAFEKFSLTS KEANKNGNLN FGGPHFEKAT SPMNTSVKQG 840 KGDSNHTTSQ PKAASADIDR AQAQQSTYSQ PGMVVAHNQA RDADIRALSE LTRALDKKEA 900 LLMELRNTNN NILENQNSGE CSLKDSEPFK KHYATVSSAL LNLRQRNTYP ANSLPPWLKQ 960 PANSTVYGGL PSSFDSSISQ ESGSSVAEIV EVSRSKAHMM VNAAIQAMSS RKGGEDAYVR 1020 IREALDSIDN QHLPSDSRLS LNRSQEQVNG NLGHRNQLIS STSDPNFTSD SPGPKPNTDT 1080 EKTEAQVLSD VISACVMAVH MIQTCTERQY PPAVVAQVLD YAVTSLHPRC PQNVGIYREI 1140 QMCMGRIKTQ ILALVPT

Sequence ? help Back to Top

Protein Sequence Length: 1157 aa Download sequence

MAPTKKSKSV KRYATVNEAS PEKYGGGSNK KKQRKRKLSD KLGPEWSKGE LERFYDAYRK  60
YGKDWRKVAA AVRNRSIEMV DALYNMNRAY LSLPEGTASV VGLKAMMTDH YNVMEGSDSE  120
RESNDALGFS RKPQKRKLGK DQLSASKDVF QSHSNASHEG CLSLLKRRRL DGGQPRAVGK  180
RTPRFPVSYA YKKDDRDTYV SPIKKGRRSE GNNDDEVAHV AALLTEASQR GGSPQISQTP  240
YRRPVHVKSS SVQSSERMHP PRGKARANLR DPSMEEDWLE GSIGSKGAET GDYARDSLEG  300
VGTVEINWKG KKFYGKKEKA KDIGNHQFDD GGEACSGTEE GLNVSSRGKD DIEVSNTKGE  360
RFSPQGQRKR SKKLYFGDES SCLDALQTLA DLSLMMPEST MESGSSVQLK EEGTNLDVED  420
KFSVPEATST SQSRNKNKIP SAKHRVPFAI SGVEGTNSKK SKLGREPAFD TTAVSESEQQ  480
LQSTTKTWKR KRKSSVSKIS NADAPIDSNI NEPLKIEAFG EEENKPVTKG KRTNQSSTPS  540
KQWKSTRSLE GSLNSDYRRT GTDLTVTTAQ APTSNHVNLP TKRISRRKMY IPRTLHPKEK  600
SSEKKLKNQL NIRSSSAQDR ALYLKEKTSC CLSSDLVRRW CTFEWFYSAL DYPWFAKREF  660
EEYLNHVGLG HIPRLTRVEW GVIRSSLGKP RRFSEHFLHE EREKLKQYRE SVRKHYAELR  720
TGDREGLPTD LARPLSVGQR VIALHPKTRE VHDGSVLTVD HDKCRVQFDR PDIGVEFVMD  780
VDCMPLNPLD NMPEALRRQN FAFEKFSLTS KEANKNGNLN FGGPHFEKAT SPMNTSVKQG  840
KGDSNHTTSQ PKAASADIDR AQAQQSTYSQ PGMVVAHNQA RDADIRALSE LTRALDKKEA  900
LLMELRNTNN NILENQNSGE CSLKDSEPFK KHYATVSSAL LNLRQRNTYP ANSLPPWLKQ  960
PANSTVYGGL PSSFDSSISQ ESGSSVAEIV EVSRSKAHMM VNAAIQAMSS RKGGEDAYVR  1020
IREALDSIDN QHLPSDSRLS LNRSQEQVNG NLGHRNQLIS STSDPNFTSD SPGPKPNTDT  1080
EKTEAQVLSD VISACVMAVH MIQTCTERQY PPAVVAQVLD YAVTSLHPRC PQNVGIYREI  1140
QMCMGRIKTQ ILALVPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	30	38	KKKQRKRKL
2	31	39	KKKQRKRKL
3	131	139	KKKQRKRKL
4	166	170	KRRRL
5	586	607	RRKMYIPRTLHPKEKSSEKKLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein