PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g652470.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ZF-HD
Protein Properties Length: 378aa    MW: 41297.4 Da    PI: 8.6898
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g652470.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer1049.9e-3384137458
       ZF-HD_dimer   4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                       +rY+eClkNhAa++Gg+++DGCgEfmps geegt +alkCaAC+CHRnFHR+e+ 
  Pd.00g652470.m01  84 IRYRECLKNHAANIGGNVFDGCGEFMPS-GEEGTLEALKCAACDCHRNFHRKEPM 137
                       79*************************9.999********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    
MFKASLMDFR AQPQDNEMRT VGIHNGNSTY ATSPHQTLDH HIQHPHPPLQ PLIRDPDPDR  60
ALVGTPVPPT VLASGGPKST SKIIRYRECL KNHAANIGGN VFDGCGEFMP SGEEGTLEAL  120
KCAACDCHRN FHRKEPMNVA FGSGGGGTES SSEDLNVFQS NNAEGGLPMP PFAMSKKRFR  180
TKFTQEQKDR LMEFAEKVGW RIQKQDEEEV ERFCSEVGVK RQVLRVWMHN NKNSAKKQSD  240
ILTTPATTTT FATVPKTSSP SSSSSSSNPH QTKFSLSLSH KSISTSWNLH KTLPRSQRSS  300
LLNLYGPPGP PPTGSISTVH DRVMMLSDGR GELGNALGVS LNLNTTTNAC LVTFNGVIKS  360
VEFDKEEGSP VGTKSMAH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18350.12e-55ZF-HD family protein