PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g650530.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GRF

Protein Properties

Length: 593aa MW: 63879.6 Da PI: 8.2422

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g650530.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.8	1.1e-24	210	254	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRC+r++++++k+CErH++rgr+rsrk++e+ Pd.00g650530.m01 210 DPEPGRCRRTDGKKWRCWRDAVPDQKYCERHMNRGRHRSRKPVEP 254 79****************************************985 PP
2	QLQ	62.5	1.1e-21	144	180	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT++Q+++L++Q+l+yKy+ an+P+P++Ll +i+k Pd.00g650530.m01 144 GPFTPSQWMELEHQALIYKYITANVPIPSNLLIPIKK 180 59*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 593 aa Download sequence
MDFGVVGFDG LGGAAAETGF ASLASSSSDQ ETKHKWYGSG FHKQGRSADT VEEDWRSSKM 60 PKTDDFLSAS KTMPNNSTHF SDGQQLLSFS NSPNSEAVLV DKSTQNASLP YFHQPLSAYN 120 RSAGHNTGSF NGAAMHWAIA GARGPFTPSQ WMELEHQALI YKYITANVPI PSNLLIPIKK 180 ALDSAFPNGL QRPNTLGWGS IHLGFSNNTD PEPGRCRRTD GKKWRCWRDA VPDQKYCERH 240 MNRGRHRSRK PVEPVAGTTA AATTTTTTTT SKQLMPSASS SASSASIPAG GGSSSLSIAN 300 QQLKSLQPSA SNSSAATQMN RMFVSKESVG ERMHQTPGPS MLSKENPFLI QKQQMGYEES 360 SRTEFGLVPS DSLLNPSQKG SSLMSCRNYG SSSQNLTDPA ETNSQQHSLR HFIDDWPKNQ 420 SDRPAISWPD QFDMQSDRTQ LSISIPIASS DFIPSTSSTN NEKLTLSPLR LSRELDPKPM 480 GLGVGSALNA QNNKQANWIP ISWETSLGGP LGEVLHHTNN NTAAECKNSS VLNLMTEGWD 540 KNSPSSLGSS PTGVLQKTAF GSLSNSSAGS SPRAENNNLL GSSILDSSSL PAL

Sequence ? help Back to Top

Protein Sequence Length: 593 aa Download sequence

MDFGVVGFDG LGGAAAETGF ASLASSSSDQ ETKHKWYGSG FHKQGRSADT VEEDWRSSKM  60
PKTDDFLSAS KTMPNNSTHF SDGQQLLSFS NSPNSEAVLV DKSTQNASLP YFHQPLSAYN  120
RSAGHNTGSF NGAAMHWAIA GARGPFTPSQ WMELEHQALI YKYITANVPI PSNLLIPIKK  180
ALDSAFPNGL QRPNTLGWGS IHLGFSNNTD PEPGRCRRTD GKKWRCWRDA VPDQKYCERH  240
MNRGRHRSRK PVEPVAGTTA AATTTTTTTT SKQLMPSASS SASSASIPAG GGSSSLSIAN  300
QQLKSLQPSA SNSSAATQMN RMFVSKESVG ERMHQTPGPS MLSKENPFLI QKQQMGYEES  360
SRTEFGLVPS DSLLNPSQKG SSLMSCRNYG SSSQNLTDPA ETNSQQHSLR HFIDDWPKNQ  420
SDRPAISWPD QFDMQSDRTQ LSISIPIASS DFIPSTSSTN NEKLTLSPLR LSRELDPKPM  480
GLGVGSALNA QNNKQANWIP ISWETSLGGP LGEVLHHTNN NTAAECKNSS VLNLMTEGWD  540
KNSPSSLGSS PTGVLQKTAF GSLSNSSAGS SPRAENNNLL GSSILDSSSL PAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	1e-87	GRF family protein