PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g650340.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 191aa MW: 21622.5 Da PI: 8.4994 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.2 | 3.2e-19 | 72 | 126 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq +Le+ F+++ +++ +++++LA+kl+L rqV vWFqNrRa+ k Pd.00g650340.m01 72 RKKLRLSKEQSATLEDSFREHTTLNPKQKQDLARKLNLRPRQVEVWFQNRRARTK 126 788899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 123.8 | 8.3e-40 | 72 | 159 | 1 | 88 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88 +kk+rlskeq+++LE+sF+e+++L+p++K++lar+L+l+prqv+vWFqnrRARtk+kq+E d+e Lk+++++lkeen+rL+ke +eL+ Pd.00g650340.m01 72 RKKLRLSKEQSATLEDSFREHTTLNPKQKQDLARKLNLRPRQVEVWFQNRRARTKLKQTEADCELLKKCCETLKEENRRLHKELQELN 159 69************************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence |
MSFDEACNTG LGLSLGCRPS TASKIEEAES TDLHQAVAVQ EQASSPCSGA FSSFSNSASE 60 ELYEQDHEGS PRKKLRLSKE QSATLEDSFR EHTTLNPKQK QDLARKLNLR PRQVEVWFQN 120 RRARTKLKQT EADCELLKKC CETLKEENRR LHKELQELNF QQPLSPCALL VKKSATAVTT 180 IIIMGRRRVP F |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 121 | 129 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22800.1 | 4e-48 | HD-ZIP family protein |