PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g650300.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 207aa MW: 22350.8 Da PI: 7.0813 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 27.9 | 5.4e-09 | 2 | 26 | 20 | 46 |
TTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 20 GggtWktIartmgkgRtlkqcksrwqk 46 G++ W+ Ia++m gRt++++k++w++ Pd.00g650300.m01 2 GSR-WSVIASRMS-GRTDNDVKNYWNT 26 788.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence |
MGSRWSVIAS RMSGRTDNDV KNYWNTKLKK KLFGGKQNLT TKNCKEPTNN ATLPGSAASL 60 ALPCVPKAEP QDSAFSTFQT QIPATLHMLT DVNSGLNACN QTWTLNSPDQ LYSSKVMAFS 120 DFRASSKKSY TTVSLSQDGS NISDSSSIAA VDKCASLPGN GSLDDSGMFT DFGLPYDVNY 180 GMWFGEKTSE FGPASCTNFG DLFSNSY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57620.1 | 4e-14 | MYB family protein |