PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g649770.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HSF

Protein Properties

Length: 403aa MW: 45379.6 Da PI: 4.5939

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g649770.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	110.8	1e-34	42	133	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k++e++ed++++ ++sws+ nsfvv+d+++f++++Lp+yFkh nf+SF+RQLn+YgF+kv+ ++ weF+++ F g+++ll Pd.00g649770.m02 42 FLTKTFEMVEDPSTDAIVSWSRARNSFVVWDSHKFSTTLLPRYFKHGNFSSFIRQLNTYGFRKVDPDR---------WEFANEGFLGGQRHLL 125 9**************************************************************999.........************ PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 ++ikr+++ Pd.00g649770.m02 126 KTIKRRRH 133 ***975 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MDGVVVKEEE IVTCTVGSSS SSSSSFSPQP IEGLHEVGPP PFLTKTFEMV EDPSTDAIVS 60 WSRARNSFVV WDSHKFSTTL LPRYFKHGNF SSFIRQLNTY GFRKVDPDRW EFANEGFLGG 120 QRHLLKTIKR RRHVSQSMQQ EGGGGACVEL GQYGLETELE RLKRDRNVLM TEIVRLRQQQ 180 QNSKEQVMAM EGRLQTTEKK QQQIMAFLAK ALNSPSFIQN LVEKKARNKE LRGMEIGRKR 240 RLAASPSVEN LQEKPKTHVV DYSASQDQGE LETMESQIET FFSAAALDNE SSSDIIDPHS 300 SSVGGNLGIV NETTWEELWS DELIGGNPEE DVIVVGDESD IDVAVEDLVA EPADWGEDLQ 360 ELVDQMGYLI RYCMGDGQSC KGANDADRPT ETFERFRSLN LYF

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MDGVVVKEEE IVTCTVGSSS SSSSSFSPQP IEGLHEVGPP PFLTKTFEMV EDPSTDAIVS  60
WSRARNSFVV WDSHKFSTTL LPRYFKHGNF SSFIRQLNTY GFRKVDPDRW EFANEGFLGG  120
QRHLLKTIKR RRHVSQSMQQ EGGGGACVEL GQYGLETELE RLKRDRNVLM TEIVRLRQQQ  180
QNSKEQVMAM EGRLQTTEKK QQQIMAFLAK ALNSPSFIQN LVEKKARNKE LRGMEIGRKR  240
RLAASPSVEN LQEKPKTHVV DYSASQDQGE LETMESQIET FFSAAALDNE SSSDIIDPHS  300
SSVGGNLGIV NETTWEELWS DELIGGNPEE DVIVVGDESD IDVAVEDLVA EPADWGEDLQ  360
ELVDQMGYLI RYCMGDGQSC KGANDADRPT ETFERFRSLN LYF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	125	131	LKTIKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-128	HSF family protein