PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g649260.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 248aa MW: 28210.6 Da PI: 5.83 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 61.4 | 1.9e-19 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd+ll+d+++ +G g W+++++ g++R++k+c++rw++yl Pd.00g649260.m01 14 RGPWTAEEDKLLADYIRAHGEGKWSSVSKQAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.6 | 1.1e-16 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T++E++l+++++k+lG++ W++Ia +++ gRt++++k++w++ Pd.00g649260.m01 67 RGNITQDEEDLIIRLHKLLGNR-WSLIAGRIP-GRTDNEIKNYWNTN 111 7999******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MGRRPCCSKE GVKRGPWTAE EDKLLADYIR AHGEGKWSSV SKQAGLKRCG KSCRLRWLNY 60 LRPNIKRGNI TQDEEDLIIR LHKLLGNRWS LIAGRIPGRT DNEIKNYWNT NLCKEPPPPP 120 NNFVSCRPSK EASSDPQQQS KAEVNLSNVP KYNNQNAESE CSEGSLSSLP TTREEEDYSS 180 RDLWMNFYTR EMSLSQFLDI DFSNLSNLFA EVIVGGYSST KAMHDDDVEA YFGAQLAAFT 240 DLADEWIM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 4e-61 | MYB family protein |