PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g647900.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ARR-B

Protein Properties

Length: 558aa MW: 61744.9 Da PI: 7.1462

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g647900.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	46	1.2e-14	156	186	25	55
G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++A+Pk+il+lm+v+ Lt+e+v+SHLQkYRl Pd.00g647900.m01 156 NEAVPKKILDLMNVEKLTRENVASHLQKYRL 186 57****************************8 PP
2	Response_reg	78.3	2.6e-26	20	128	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 vl vdD+p+ ++ll +l++ +y +v++++++ al+ll+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++a+g+ +++ + + Pd.00g647900.m01 20 VLAVDDNPICLKLLDALLRRCKY-HVTTTSQAITALKLLRENKnkFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANGDTKLVMKGIT 110 799******************.***********888888***************87754.558**************** PP TTESEEEESS--HHHHHH CS Response_reg 92 aGakdflsKpfdpeelvk 109 Ga d+l Kp+ +e+l + Pd.00g647900.m01 111 HGACDYLLKPVRIEQLKN 128 *************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 558 aa Download sequence
MTVEGVLDEP RDQFPIGMRV LAVDDNPICL KLLDALLRRC KYHVTTTSQA ITALKLLREN 60 KNKFDLVISD VHMPDMDGFK LLELVGLEMD LPVIMLSANG DTKLVMKGIT HGACDYLLKP 120 VRIEQLKNIW QHVIRRKKVD SKDQNSCNQE KSHVGNEAVP KKILDLMNVE KLTRENVASH 180 LQKYRLYLKR ISRVANQQAN MVAALGTSDS SYLRMTSVNG VGNFHPLTGP GQFHNNAFRS 240 FPPSGMVGRL NTPAGLGLHC LPSSGMFQLS HAQNPSNSIN DQPLIFPGNR NGNILPAPLE 300 LDQQHGTEAA CVADFSAAIN GTTVYPTSSG LPDAKSSVSR ASLRSELSPP FLDHGRLNDN 360 WSSASQPSMF CSNSFSSRDS FKQPTLLQSN LKDNMPVMSS QIGSSQIDVS ISCQSQDSRF 420 GLPIQASAIS NNSGQTINND LFQGWDDHKP DSQYPSDVMC TSMNSLMPDN DTVAPFDQNS 480 DSRRTTFQRN MGFNSIGQSN FLDPLLMKYD DVELTQDASL KMRPGYLMDQ RKLQGGYNPN 540 NVGSLDELVS AMMKQERR

Sequence ? help Back to Top

Protein Sequence Length: 558 aa Download sequence

MTVEGVLDEP RDQFPIGMRV LAVDDNPICL KLLDALLRRC KYHVTTTSQA ITALKLLREN  60
KNKFDLVISD VHMPDMDGFK LLELVGLEMD LPVIMLSANG DTKLVMKGIT HGACDYLLKP  120
VRIEQLKNIW QHVIRRKKVD SKDQNSCNQE KSHVGNEAVP KKILDLMNVE KLTRENVASH  180
LQKYRLYLKR ISRVANQQAN MVAALGTSDS SYLRMTSVNG VGNFHPLTGP GQFHNNAFRS  240
FPPSGMVGRL NTPAGLGLHC LPSSGMFQLS HAQNPSNSIN DQPLIFPGNR NGNILPAPLE  300
LDQQHGTEAA CVADFSAAIN GTTVYPTSSG LPDAKSSVSR ASLRSELSPP FLDHGRLNDN  360
WSSASQPSMF CSNSFSSRDS FKQPTLLQSN LKDNMPVMSS QIGSSQIDVS ISCQSQDSRF  420
GLPIQASAIS NNSGQTINND LFQGWDDHKP DSQYPSDVMC TSMNSLMPDN DTVAPFDQNS  480
DSRRTTFQRN MGFNSIGQSN FLDPLLMKYD DVELTQDASL KMRPGYLMDQ RKLQGGYNPN  540
NVGSLDELVS AMMKQERR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	185	194	RLYLKRISRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	1e-112	ARR-B family protein