PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g647600.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 567aa    MW: 63367.4 Da    PI: 8.6241
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g647600.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.32.2e-1622107899
                       -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                       s  l+s rl +p +f+ +++g +  s  ++l  +sg+ W+v l   +k g  ++  GW  Fv+++ ++ gDf++F++dg+ +f  +v +f++
  Pd.00g647600.m01  22 SADLSSERLKIPERFMIHMEGRT--SGLVSLFGPSGNAWNVDL--IQKNGDLFFHHGWPAFVRDHFVECGDFLIFRYDGELCF--TVLIFDQ 107
                       66788999********9998884..458***************..77778899*************************99999..9999986 PP
2B342.61.1e-132473271394
                       TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                       s  l +p kf  +h   ++++++l+l + +g+sW+v+    ++   +++l +GW  Fv+ n++k gD+++F+l+++ ef+ +v
  Pd.00g647600.m01 247 SYTLNIPCKFSVAHL--PNCKVKLVLHNWKGESWTVNSVPsTRVHTSHTLCGGWMAFVRYNDIKLGDICIFELVHECEFRVHV 327
                       556899****99996..45999***************9445555667999*************************99996665 PP
3B347.62.9e-15456547296
                       EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
                B3   2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                       +k++++ +   s  l +p +f +eh  +     +++++l++++g+ W+v+   + k++  +++ +GW  Fv+ n+++ gD+++F+l+g+  +e
  Pd.00g647600.m01 456 VKIMKKFNICGSYTLKIPYQFSTEHlpN----YKTEIVLRNSKGECWTVNSVPDSKGRVvHTFCGGWMAFVRGNDVNIGDICIFELVGK--RE 542
                       5666555666667899*********533....3468***************5544444379999*********************9984..44 PP

                       .EEEE CS
                B3  92 lvvkv 96 
                       + v++
  Pd.00g647600.m01 543 MQVHI 547
                       55655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 567 aa     Download sequence    
MAEEALKEMT NARRPHFFAF YSADLSSERL KIPERFMIHM EGRTSGLVSL FGPSGNAWNV  60
DLIQKNGDLF FHHGWPAFVR DHFVECGDFL IFRYDGELCF TVLIFDQSAC EKEAAFHSEC  120
GQESSNFEKY MGRKRGREEA ASSGKLVDCV AKKMRDSSSE EGCGHEGVMC EEATCSKEIK  180
RAEKPGLDIV LCKANASIQN TCGKGDGLNV NGRVCVQMSS AHEIAQSFSS SNPYFVRIMK  240
SFNISGSYTL NIPCKFSVAH LPNCKVKLVL HNWKGESWTV NSVPSTRVHT SHTLCGGWMA  300
FVRYNDIKLG DICIFELVHE CEFRVHVQSG ETSSWLSAEL ALPSIKTFKS LSKIMTGNSP  360
KVHSKSIRKI EKADKIAPKK FQEAAFTNDA RKYGSTSKSL TKVSLSQSKA ANKKLVNHRK  420
KVVEDELNPG SSLRMRLTLD EERAARSFTS CFPSFVKIMK KFNICGSYTL KIPYQFSTEH  480
LPNYKTEIVL RNSKGECWTV NSVPDSKGRV VHTFCGGWMA FVRGNDVNIG DICIFELVGK  540
REMQVHISGI GKKGFDHQDG EATSNAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.14e-20B3 family protein