PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g646560.m02
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 288aa    MW: 31871.8 Da    PI: 6.1738
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g646560.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.71.3e-0568117154
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       +r  + erE++ R++ N+ f eL + l  +    ++ + Ka+iL +A++ +k+L
  Pd.00g646560.m02  68 KRIHKAEREKQKREHFNELFLELADALELN----QQNNGKASILCEATRLLKDL 117
                       688899*********************998....68899999******999987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MKVYAQTHWF CPAFPTAGED IRPYSVLRDG YRIMGSQDPV PAADKANATE ASVRGACSGK  60
KIQAKIPKRI HKAEREKQKR EHFNELFLEL ADALELNQQN NGKASILCEA TRLLKDLIGQ  120
IEYLQKENAS LLSESNYMTI EKNELREDNS ALETQIEKLH SEIEDKVVQS KPGLNAAPPC  180
AELRPEVASH FTGTSVSLPT QDPSLQQASA VFVMPLCPDL QSYPLPDAAQ LTSNTTSHVS  240
KPHARYPTSV DSWPSQLLGE KPTAGKESRQ LGNSSNICRS RETDPDNM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.26e-55bHLH family protein