PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g646560.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 288aa MW: 31871.8 Da PI: 6.1738 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 16.7 | 1.3e-05 | 68 | 117 | 1 | 54 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +r + erE++ R++ N+ f eL + l + ++ + Ka+iL +A++ +k+L Pd.00g646560.m02 68 KRIHKAEREKQKREHFNELFLELADALELN----QQNNGKASILCEATRLLKDL 117 688899*********************998....68899999******999987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 288 aa Download sequence |
MKVYAQTHWF CPAFPTAGED IRPYSVLRDG YRIMGSQDPV PAADKANATE ASVRGACSGK 60 KIQAKIPKRI HKAEREKQKR EHFNELFLEL ADALELNQQN NGKASILCEA TRLLKDLIGQ 120 IEYLQKENAS LLSESNYMTI EKNELREDNS ALETQIEKLH SEIEDKVVQS KPGLNAAPPC 180 AELRPEVASH FTGTSVSLPT QDPSLQQASA VFVMPLCPDL QSYPLPDAAQ LTSNTTSHVS 240 KPHARYPTSV DSWPSQLLGE KPTAGKESRQ LGNSSNICRS RETDPDNM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G47640.2 | 6e-55 | bHLH family protein |