PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g645640.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HSF

Protein Properties

Length: 457aa MW: 52100.4 Da PI: 5.0609

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g645640.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.9	1e-35	34	124	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k+y++++d++ ++++swse+g sfvv+d++efak++Lp yFkh+nf+SFvRQLn+YgF+k++ e+ weF++++F +g ++ll Pd.00g645640.m01 34 FLTKTYDLVDDPSSNHVVSWSETGCSFVVWDPTEFAKEMLPMYFKHNNFSSFVRQLNTYGFRKIDPEQ---------WEFANEEFLRGGRHLL 117 9*************************************************************9998.........************ PP XXXXXXX CS HSF_DNA-bind 95 ekikrkk 101 +ki+r+k Pd.00g645640.m01 118 KKIHRRK 124 ***98 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MAVNAGLLYR YCLPRFLGFE IQGTQGGSNA PAPFLTKTYD LVDDPSSNHV VSWSETGCSF 60 VVWDPTEFAK EMLPMYFKHN NFSSFVRQLN TYGFRKIDPE QWEFANEEFL RGGRHLLKKI 120 HRRKPIHSHS MQNHEYSSVP LSETEREEYE KKINRLNHDK SLLELELQRH QRENQEFDYQ 180 IQILQEQLQK MEHQQKQYTS FLAQLLQKPG LASILMQKSE IHNKKRRLLT SSHFPDDFKM 240 EILNLNTQNE NLGTISTPII KLDQLEKMES SLNFWEDFLH GIGEAMPEEV NDIGSLSQAS 300 PIIVTEIQDP GMNSRPCSPR SRLSSPNSMN VSSPEVIGSA NFLDILAITS TCHNVDFRPK 360 SSGIDMNSKP DSAPAAEALK EMVQEMKNAE PAAANDMFWE QCLTETPGLD DAQEVQSERG 420 DSDGGVSDTN PAIQKKLWWN TDVDNFTNQI GRLTPAS

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MAVNAGLLYR YCLPRFLGFE IQGTQGGSNA PAPFLTKTYD LVDDPSSNHV VSWSETGCSF  60
VVWDPTEFAK EMLPMYFKHN NFSSFVRQLN TYGFRKIDPE QWEFANEEFL RGGRHLLKKI  120
HRRKPIHSHS MQNHEYSSVP LSETEREEYE KKINRLNHDK SLLELELQRH QRENQEFDYQ  180
IQILQEQLQK MEHQQKQYTS FLAQLLQKPG LASILMQKSE IHNKKRRLLT SSHFPDDFKM  240
EILNLNTQNE NLGTISTPII KLDQLEKMES SLNFWEDFLH GIGEAMPEEV NDIGSLSQAS  300
PIIVTEIQDP GMNSRPCSPR SRLSSPNSMN VSSPEVIGSA NFLDILAITS TCHNVDFRPK  360
SSGIDMNSKP DSAPAAEALK EMVQEMKNAE PAAANDMFWE QCLTETPGLD DAQEVQSERG  420
DSDGGVSDTN PAIQKKLWWN TDVDNFTNQI GRLTPAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45710.1	7e-79	HSF family protein