PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g644160.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CAMTA

Protein Properties

Length: 1085aa MW: 121560 Da PI: 6.2102

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g644160.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	175.6	6.5e-55	104	218	3	116
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptf 94 +e ++rwlk+ e++ iL+n+ek++l+ e++++p+sgsl+L+n++++r+fr+DG++w+kkkdg+tv E+he+LKvg+ e+l+cyYah+e+np+f Pd.00g644160.m01 104 QEaQTRWLKPAEVLYILQNHEKFKLAPEPPQQPSSGSLFLFNKRVLRFFRRDGHHWRKKKDGRTVGEAHERLKVGNAETLNCYYAHGEDNPNF 196 5669*************************************************************************************** PP CG-1 95 qrrcywlLeeelekivlvhyle 116 qrr+yw+L+ ++e+ivlvhy+e Pd.00g644160.m01 197 QRRSYWMLDPAYEHIVLVHYRE 218 ******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1085 aa Download sequence
MLNDENNPPF HSRKEPCPHL PIYSSASRYM PRLFWSVHHT SRSSKLQPYT PRTTGSPVIR 60 FSVVLVDANE HKSNAFSAVR GQVLIFRQSL NMMQSGYNIN DLFQEAQTRW LKPAEVLYIL 120 QNHEKFKLAP EPPQQPSSGS LFLFNKRVLR FFRRDGHHWR KKKDGRTVGE AHERLKVGNA 180 ETLNCYYAHG EDNPNFQRRS YWMLDPAYEH IVLVHYREIS EGKSSTGTFA QSPVSSSSFS 240 PSPSDKTTQN RGSTSMISDL REPYQNLSSP GSIEVNSDVA IKKNGRENPD KLYGTGESDS 300 SAKFDVSQAL RQLEEQLSLN EDSFNEFVDD NPNSDIMDRF NEFLDDTNGS DILEDHSDMT 360 NQDQFTAFHG PEYVVHDQFY GGRAQMQGNA NNSDEHSQFI GQEFADRNKE SVPWKEVLDS 420 CKPSSVVEPK EKCLYELDTN EKLPSSFRSG PTDGQEHCEW LNSDGTNVKN FSLSLPEEVD 480 SFKLSPCSSA MGTHSDYYTS LFEQGQTGTL DSDISLTVAQ KQKFTIREIS PEWGYATEAT 540 KVIIVGSFLC DPSESAWSCM FGDVEVPAQI IQDGVLRCKA PPHLFGKVTI CITSSNRVSC 600 SEVREFEYRV KSSSGTNNSP PTETTKSAEE LLLLVRFVQM LMSDSSMQNR DSVEPETLRR 660 LKADDDSWDS IIEALLLGNG SASSNIYWLL EELLKDKLQQ WLSSRSHGLD QTGCSLSKKE 720 QGIIHMVAGL GFEWALNSIL SCGVNINFRD INGWTALHWA ARFGREKMVA VLIASGASAG 780 AVTDPNSQDP IGKTPASIAA ISGNKGLAGY LSEVSLTSHL SSLTLEESEL SKGSAEVEAE 840 ITVNSISNRS LQGNEDQASL KNTLAAVRNS AQAAARIQSA FRAHSFRKRQ QKEAGVSIDD 900 YGISSDDIQG LSAMSKLAFR NPRDYNSAAV SIQKKYRGWK GRKDFLALRQ KVVKIQAHVR 960 GYQVRKHYKV ICWAVGILDK VVLRWRRKGV GLRGFRHETQ SSEESEDEDI LKVFRKQKVD 1020 GAIDEAVSRV LSMVESPKAR QQYHRMLERY HQAKAELGGT SGEADVPNSL DDTFNVEDID 1080 MYQFP

Sequence ? help Back to Top

Protein Sequence Length: 1085 aa Download sequence

MLNDENNPPF HSRKEPCPHL PIYSSASRYM PRLFWSVHHT SRSSKLQPYT PRTTGSPVIR  60
FSVVLVDANE HKSNAFSAVR GQVLIFRQSL NMMQSGYNIN DLFQEAQTRW LKPAEVLYIL  120
QNHEKFKLAP EPPQQPSSGS LFLFNKRVLR FFRRDGHHWR KKKDGRTVGE AHERLKVGNA  180
ETLNCYYAHG EDNPNFQRRS YWMLDPAYEH IVLVHYREIS EGKSSTGTFA QSPVSSSSFS  240
PSPSDKTTQN RGSTSMISDL REPYQNLSSP GSIEVNSDVA IKKNGRENPD KLYGTGESDS  300
SAKFDVSQAL RQLEEQLSLN EDSFNEFVDD NPNSDIMDRF NEFLDDTNGS DILEDHSDMT  360
NQDQFTAFHG PEYVVHDQFY GGRAQMQGNA NNSDEHSQFI GQEFADRNKE SVPWKEVLDS  420
CKPSSVVEPK EKCLYELDTN EKLPSSFRSG PTDGQEHCEW LNSDGTNVKN FSLSLPEEVD  480
SFKLSPCSSA MGTHSDYYTS LFEQGQTGTL DSDISLTVAQ KQKFTIREIS PEWGYATEAT  540
KVIIVGSFLC DPSESAWSCM FGDVEVPAQI IQDGVLRCKA PPHLFGKVTI CITSSNRVSC  600
SEVREFEYRV KSSSGTNNSP PTETTKSAEE LLLLVRFVQM LMSDSSMQNR DSVEPETLRR  660
LKADDDSWDS IIEALLLGNG SASSNIYWLL EELLKDKLQQ WLSSRSHGLD QTGCSLSKKE  720
QGIIHMVAGL GFEWALNSIL SCGVNINFRD INGWTALHWA ARFGREKMVA VLIASGASAG  780
AVTDPNSQDP IGKTPASIAA ISGNKGLAGY LSEVSLTSHL SSLTLEESEL SKGSAEVEAE  840
ITVNSISNRS LQGNEDQASL KNTLAAVRNS AQAAARIQSA FRAHSFRKRQ QKEAGVSIDD  900
YGISSDDIQG LSAMSKLAFR NPRDYNSAAV SIQKKYRGWK GRKDFLALRQ KVVKIQAHVR  960
GYQVRKHYKV ICWAVGILDK VVLRWRRKGV GLRGFRHETQ SSEESEDEDI LKVFRKQKVD  1020
GAIDEAVSRV LSMVESPKAR QQYHRMLERY HQAKAELGGT SGEADVPNSL DDTFNVEDID  1080
MYQFP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	0.0	CAMTA family protein