PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g642020.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 712aa MW: 81428.7 Da PI: 7.13

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g642020.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.7	7.1e-27	186	288	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk............tekerrtraetrtgCkaklkvkkekdgkwevtkl 81 +fY+eYA+++GF++ +++s++sk+++e+++++f Cs++g+++e +k+ e+e +r+ ++t+Cka+++vk++ dgkw+++++ Pd.00g642020.m01 186 SFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSynrprarqnkqdPENETGRRSCSKTDCKASMHVKRRPDGKWVIHNF 278 5****************************************99999999998887665666669999******************** PP FAR1 82 eleHnHelap 91 ++eHnHel p Pd.00g642020.m01 279 VKEHNHELLP 288 *****975 PP

Sequence ? help Back to Top
Protein Sequence Length: 712 aa Download sequence
MARICSSPIN KLGAKLKDLR IGHSLNPLAC AIIFPSLRSK LSPSPPPSSI CNTQRESQSV 60 ILSFKIRWEV ILVPYIVLQT SKMIFSDNNQ LKLNNLTMDI DLRLPSGEPD KEDEEPHGID 120 NMLEHEEKLQ NGDIENGNIV DVRDEVHAED GGDLNSPTAD MVVFKEDTNL EPLFGMEFAS 180 HGEAYSFYQE YARSMGFNTA IQNSRRSKTS REFIDAKFAC SRYGTKREYD KSYNRPRARQ 240 NKQDPENETG RRSCSKTDCK ASMHVKRRPD GKWVIHNFVK EHNHELLPAQ AVSEQTRKMS 300 STNEEFEKRW WKILEKFELK DDEWTQSLYE DRKQWVPTYM RDVCLAGMSA VQRSESVNSF 360 FDKYVHKKTT VQEFLKQYEA ILQDRYEEEA KADSDTWNKQ PTLRSPSPLE KSVSGVYTHA 420 VFKKFQVEVL GAVACHPKRE GQDETTITFR VQDFEKNQDF IVTWNEMKTE VSCLCCLFEY 480 KGYLCRHALI VLQICGLSAI PAQYILKRWT KDVKNRHLVG EESDHGLSRV QKFNDLCQRA 540 MKVIEEGSLS QESYSVACRA LEEAFGNYDS QNRSMGKTNK KKNPTKKRKV NSEPDVMTVG 600 AQDSLQQMDK LNPRAVTLDG YYGAPQSVQG MVQLNLMAPT RDNYYGNQQA IQGLGQLNSI 660 APSHDGYYSA QQSMHGLGQM DFFRTAGGFT YGMRDDPNVR TAPLHDDASR HA

Sequence ? help Back to Top

Protein Sequence Length: 712 aa Download sequence

MARICSSPIN KLGAKLKDLR IGHSLNPLAC AIIFPSLRSK LSPSPPPSSI CNTQRESQSV  60
ILSFKIRWEV ILVPYIVLQT SKMIFSDNNQ LKLNNLTMDI DLRLPSGEPD KEDEEPHGID  120
NMLEHEEKLQ NGDIENGNIV DVRDEVHAED GGDLNSPTAD MVVFKEDTNL EPLFGMEFAS  180
HGEAYSFYQE YARSMGFNTA IQNSRRSKTS REFIDAKFAC SRYGTKREYD KSYNRPRARQ  240
NKQDPENETG RRSCSKTDCK ASMHVKRRPD GKWVIHNFVK EHNHELLPAQ AVSEQTRKMS  300
STNEEFEKRW WKILEKFELK DDEWTQSLYE DRKQWVPTYM RDVCLAGMSA VQRSESVNSF  360
FDKYVHKKTT VQEFLKQYEA ILQDRYEEEA KADSDTWNKQ PTLRSPSPLE KSVSGVYTHA  420
VFKKFQVEVL GAVACHPKRE GQDETTITFR VQDFEKNQDF IVTWNEMKTE VSCLCCLFEY  480
KGYLCRHALI VLQICGLSAI PAQYILKRWT KDVKNRHLVG EESDHGLSRV QKFNDLCQRA  540
MKVIEEGSLS QESYSVACRA LEEAFGNYDS QNRSMGKTNK KKNPTKKRKV NSEPDVMTVG  600
AQDSLQQMDK LNPRAVTLDG YYGAPQSVQG MVQLNLMAPT RDNYYGNQQA IQGLGQLNSI  660
APSHDGYYSA QQSMHGLGQM DFFRTAGGFT YGMRDDPNVR TAPLHDDASR HA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	0.0	FAR1 family protein