PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g642000.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | FAR1 | ||||||||
Protein Properties | Length: 557aa MW: 62393.9 Da PI: 7.886 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 76.4 | 5.8e-24 | 101 | 187 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +Y+eYA++vGF +++++s++sk++g++++ + Cs+ g+++e+ ++ + + t+t+Cka+l++k+++dgkw+v+++ +eHnHe++p Pd.00g642000.m02 101 YYREYARSVGFGITIKASRRSKKSGKFIDIKIACSRFGSKRESGTT---VNPRLCITKTDCKASLHIKRKDDGKWVVHSFIKEHNHEMCP 187 9*****************************************9888...5666789********************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 557 aa Download sequence |
MEIDLELPSC EQDKLETGSD KDVNVVDVTD EKNVEEHVNS PTTSEHVKEA DGLDANQSAC 60 SLQAQDDAKN MGLNAVDEGK RVIQEPQNGL EFESKEEAYS YYREYARSVG FGITIKASRR 120 SKKSGKFIDI KIACSRFGSK RESGTTVNPR LCITKTDCKA SLHIKRKDDG KWVVHSFIKE 180 HNHEMCPDDF IYAISGRNKK PATVACQKKG SVFKKFKVEV LGLASCQLQK DGENEATAIF 240 RVDDLEERQN FTVSWNEAEL KVCCSCHSFE YKGFLCRHAI LVLQVSGVSS IPSHYILKRW 300 TKDAKVRCTV SDGPKRLNYR VQRFNDLCKL AVKLGEEGSL SPETYHIAFQ ALEAALKHCV 360 DANNSVRTVS EANMSANHGF NDVEEVNPSS NMAKSSKKKK TYKKRKVQTE QDSVTIRLQD 420 SCQQMMKSRA HNRDNCYVPQ QELEGEHGSR SRGLDSYYGA QQSMQGMGQL NSIAPISDGY 480 YGNQQATQGQ LHSLPTRVGH YGTQQSMRGM GQLSFRSPTV QSCFEIQGNL QDMEQSAGSS 540 HFHGNASKHL HDKHQTQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G32250.2 | 1e-76 | FAR1 family protein |