PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g640640.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 286aa MW: 31155.3 Da PI: 7.1587 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 107.2 | 8.4e-34 | 182 | 239 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s++prsYYrCt+++C vkk+vers edp++v++tYeg+Hnh+ Pd.00g640640.m01 182 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCGVKKRVERSFEDPSTVITTYEGQHNHP 239 8********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 286 aa Download sequence |
MSDHEHKDLY YHDLFQYEDH EHLNGGMISI NHSQNLQGIE VPSYMNNTSF AECLKGPMDY 60 NTLATAFGLA SSTSDEVIFS SANEGDQKPA EHIRYSGGGG DGDGGGGETP LTPNSSVSSS 120 SAEAGAEEDS GKSKKDRQPK GSSEDGGDSS KKVMSKAKKK GEKKQREPRF AFMTKSEVDH 180 LEDGYRWRKY GQKAVKNSPY PRSYYRCTTQ KCGVKKRVER SFEDPSTVIT TYEGQHNHPL 240 PATLRGNAAA SSAFFPHAAA AFNYAPITGS AGLVVSLHVP QTRAMI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18170.1 | 7e-51 | WRKY family protein |