PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g640530.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 298aa    MW: 33573 Da    PI: 6.5113
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g640530.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.50.000582482841354
                       HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
               HLH  13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                       R+++++    Lr ++P  +       ++ +++L +Av+Y+ksL
  Pd.00g640530.m01 248 RQKMKKMVRVLRGIVPGgN------EMNTVDVLDEAVQYLKSL 284
                       7889999999999999855......8***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MNIGVTFKRY RAIKEVGKII MSVGVIAYYQ LMQVCQAEYF RQLLKPVTYF NYLGFLMQRD  60
QQFDPNKAAP PFANQVGNNY MHIPVASAHG AVLPHEAKHI KPFHGVEFQT SDICPKNFII  120
FDQTDHRSQI MFNPAIAHKI TGPAFNICAA YIQDNLGLNE GNNEDRETSS SLKEDSDDID  180
ALLSLEEEEL EEYDEEEVST ARTHGNYRSM SPDSCSNYGL KTKKKRQCSS LGKSSGIGSS  240
SCNSERKRQK MKKMVRVLRG IVPGGNEMNT VDVLDEAVQY LKSLKVELQN LGVENLND
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1223252KKKRQCSSLGKSSGIGSSSCNSERKRQKMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29950.11e-31bHLH family protein