PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g639960.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family TCP
Protein Properties Length: 449aa    MW: 48350.1 Da    PI: 7.4241
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g639960.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP115.28.4e-36671922134
               TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksa 94 
                        g+kdrhsk+ T++g+RdRRvRls+++a++f+dLqd+LG+d++sk++eWL+++a  ai el+++++s +    +  ++ s++     k+a+ +
  Pd.00g639960.m01  67 SGGKDRHSKVWTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKAAADAIAELPSLNNSFP----DTPKQLSDE-----KRASCE 150
                       689*************************************************************44444....222233333.....222222 PP

               TCP  95 a..kskksqksaasalnlakesrakarararertrekmrikn 134
                       +  ++ ++ +  +  ++  +  r kar+rarer ++++ +++
  Pd.00g639960.m01 151 HgnSETSKGSGLSLSRSEIRVNRVKARERARERAAKDKEKES 192
                       21133333333444445555888*********8877766654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    
MEVEEIQAQA CKFPRIGNGS SRATNPAADD EDQDPSCLGL KRAVTADAGN RLRGWHHSRI  60
IRVSRASGGK DRHSKVWTSK GLRDRRVRLS VTTAIQFYDL QDRLGYDQPS KAVEWLIKAA  120
ADAIAELPSL NNSFPDTPKQ LSDEKRASCE HGNSETSKGS GLSLSRSEIR VNRVKARERA  180
RERAAKDKEK ESNESASHIA HHHQQNSSNL NNSISQSASF TELLTGGIGT NSSNNNNSPT  240
AAAHQQQNHG GEPILFHKAA AAGGGGPMDY FSSGLLGLSS STRTHHSSGF SSQIQLGMNS  300
IPQTMSVVSP FSVSGDHHHN HNPELQHFSF VPDHLIPVTT SSQPGNGGDY NLNFSISSSG  360
GLAGFNRGTL QSNSSSPSLL PHHLQRFSPI DGSSNLGLIA ACNIPTAMEA GIQTTREKQR  420
TDLDHDQSLA AHLSFFLESE AKEAVATCE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18390.14e-49TCP family protein