PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g639180.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HD-ZIP
Protein Properties Length: 849aa    MW: 92998.9 Da    PI: 6.2474
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g639180.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox581.6e-182179357
                      --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                      k  ++t+eq+e+Le+++ ++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  Pd.00g639180.m01 21 KYVRYTPEQVEALERVYSECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 79
                      6789*****************************************************97 PP
2START167.31e-521703762203
                       HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEE CS
             START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galq 92 
                       +aee+++e+++ka+ ++  Wv++  +++g++++ +++ s+++sg a+ra+g+v  +++  v+e+l+d+  W ++++  ++l  i  g  g+++
  Pd.00g639180.m01 170 IAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPT-KVAEILKDRISWFRDCRCLDVLSLIPAGngGTIE 261
                       68999*****************************************************.8888888888****************9999**** PP

                       EEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHH CS
             START  93 lmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwll 181
                       l++++++a+++l++ Rdf+++Ry+ +l++g++v++++S++s +  p+   s+s+vRae+lpSg+li+p+++g+s + +v+hvdl++++++++l
  Pd.00g639180.m01 262 LTYMQTYAPTTLAAaRDFWTLRYTTSLEDGSLVVCERSLTSSTGGPTgppSASFVRAEMLPSGYLIRPCEGGGSIINIVDHVDLDAWSVPEVL 354
                       ******************************************99999999******************************************* PP

                       HHHHHHHHHHHHHHHHHHTXXX CS
             START 182 rslvksglaegaktwvatlqrq 203
                       rsl++s+ + ++k++ ++l++ 
  Pd.00g639180.m01 355 RSLYESSKILAQKMTISALRHI 376
                       ****************999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 849 aa     Download sequence    
MALVMNRDSP GSSSKQMDSS KYVRYTPEQV EALERVYSEC PKPSSLRRQQ LIRECPILSN  60
IEPKQIKVWF QNRRCREKQR KESSRLQTVN RKLTAMNKLL MEENDRLQKQ VSHLVYENGF  120
MRQQLHSASG TTTDNSCESV VMSGQHQQQQ NPTPQHPQRD ANNPAGLLAI AEETLAEFLS  180
KATGTAVDWV QMIGMKPGPD SIGIVAVSRN CSGVAARACG LVSLEPTKVA EILKDRISWF  240
RDCRCLDVLS LIPAGNGGTI ELTYMQTYAP TTLAAARDFW TLRYTTSLED GSLVVCERSL  300
TSSTGGPTGP PSASFVRAEM LPSGYLIRPC EGGGSIINIV DHVDLDAWSV PEVLRSLYES  360
SKILAQKMTI SALRHIRQIA QETSGEIQYG GGRQPAVLRT FCQRLCRGFN DAVNGFADDG  420
WSLMGSDGVE DVTITINSSP NKFLGSQYNA SIFPIFGGGV LCAKASMLLQ SVPPALLVRF  480
LREHRSEWAD YGVDAYSAAC LKASPYAVPC ARPGGFPSSQ VILPLAQTVE NEEFLEVVRL  540
EGHAFSPEDV ALARDMYLLQ LCSGVDENAV GSCAQLVFAP IDESFADDAP LLPSGFHVIP  600
LDPKTDGPTA NRTLDLASTL EVGPSGSRPV NEADGNSYNL RSVLTIAFQF TFENHLRDNV  660
AAMARQYVRS VVSSVQRVAM AIAPSRLSSQ MVPKPLPGSP EAHTLARWIC RSYRIHTGAD  720
LFRVDSPSGD AVLKQLWHHS DAIMCCSVKT NASPVFTFAN QAGLDMLETT LVALQDIMLD  780
KILDEAGRKI LCSEFSKITQ QGFAYLPAGL CASSMGRPVS YDQAVAWKVV NDDDSNHCLA  840
FMFMSWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein