PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g638850.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | TCP | ||||||||
Protein Properties | Length: 201aa MW: 22583.6 Da PI: 8.9887 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 104.1 | 2.3e-32 | 55 | 136 | 3 | 73 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.........ssssa..sec 73 k+drhski T++g+RdRR+Rls+e+a++fF Lqd L fdk+skt+eWLl qa p+ik+l+g+ s+s+a ++c Pd.00g638850.m01 55 CKRDRHSKINTARGLRDRRMRLSLEVARKFFWLQDALHFDKASKTVEWLLIQATPEIKKLVGDckhmmsstkSTSPAtsESC 136 69*************************************************************7777665442222221222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
MREAVAANNT LADDHRQTTT TSATLNIKMV DWDSNKNHGE MMNMDQPQIP RRRSCKRDRH 60 SKINTARGLR DRRMRLSLEV ARKFFWLQDA LHFDKASKTV EWLLIQATPE IKKLVGDCKH 120 MMSSTKSTSP ATSESCEVIS GIDEAATNTN IHINIDGGND GDDKLIQSCE IQPSAKERKV 180 QVPLRPVPAG YPNPATLTRS D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18550.2 | 2e-24 | TCP family protein |