PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g638310.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 577aa MW: 63436.5 Da PI: 8.5382 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 55.8 | 8.4e-18 | 272 | 321 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f+ Lrel+P++ ++K +Ka+ L +++eYI+ Lq Pd.00g638310.m01 272 RSKHSATEQRRRSKINDRFQMLRELIPHS----DQKRDKASFLLEVIEYIQFLQ 321 889*************************9....9*******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 577 aa Download sequence |
MELPQPRPFG TEGRKPTHDF LSLYSHPNAQ QDPRPPSQGG YLETHDFLQP LERMGKKCIA 60 KEETSVEIST AEKPASHAAA SAAAQPTSSV EHILPGGIGT YTISHISYFN QRVPKPEGSP 120 VFTVTQAQAS STDRNVEEHS NCSSYTGSGF TLWEGSALKN KGKTGKENLG ERPVGIVRGQ 180 WTSSERPAQS SSNNYRNCFS AQSSGQKNIS FMEMMKSAAK GSTQEDEIDD EEEFVLKKET 240 STTTTTATTP YKGDLRVKVD VKSSDQKANT PRSKHSATEQ RRRSKINDRF QMLRELIPHS 300 DQKRDKASFL LEVIEYIQFL QEKVNKYEGS YQGWNPDPEK LMPWQRNNPK LRESYCDQSR 360 GMNGGSGTAL VFAAKFDEKT TSVSPSIPGS CAQNPVESDT STETTFKAMD HHPGITSKPM 420 PFPLSMQPNF FTPVRSGGAA VPQLPPRLPS DAENTSQHQS MLCHTVSRAT DGAAARDKLK 480 EQELTIEDGR INISSAYSQG LLNTLTQALQ NSGVDLSQAS ISVQIELGKR ANSRSPIPKS 540 VVKDNEILSS NQGKRHSRVA SGEDSEHAPK KLKTGRN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08130.2 | 1e-133 | bHLH family protein |