PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g638310.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 577aa    MW: 63436.5 Da    PI: 8.5382
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g638310.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH55.88.4e-18272321255
                       HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       r +h++ E+rRR++iN++f+ Lrel+P++    ++K +Ka+ L +++eYI+ Lq
  Pd.00g638310.m01 272 RSKHSATEQRRRSKINDRFQMLRELIPHS----DQKRDKASFLLEVIEYIQFLQ 321
                       889*************************9....9*******************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 577 aa     Download sequence    
MELPQPRPFG TEGRKPTHDF LSLYSHPNAQ QDPRPPSQGG YLETHDFLQP LERMGKKCIA  60
KEETSVEIST AEKPASHAAA SAAAQPTSSV EHILPGGIGT YTISHISYFN QRVPKPEGSP  120
VFTVTQAQAS STDRNVEEHS NCSSYTGSGF TLWEGSALKN KGKTGKENLG ERPVGIVRGQ  180
WTSSERPAQS SSNNYRNCFS AQSSGQKNIS FMEMMKSAAK GSTQEDEIDD EEEFVLKKET  240
STTTTTATTP YKGDLRVKVD VKSSDQKANT PRSKHSATEQ RRRSKINDRF QMLRELIPHS  300
DQKRDKASFL LEVIEYIQFL QEKVNKYEGS YQGWNPDPEK LMPWQRNNPK LRESYCDQSR  360
GMNGGSGTAL VFAAKFDEKT TSVSPSIPGS CAQNPVESDT STETTFKAMD HHPGITSKPM  420
PFPLSMQPNF FTPVRSGGAA VPQLPPRLPS DAENTSQHQS MLCHTVSRAT DGAAARDKLK  480
EQELTIEDGR INISSAYSQG LLNTLTQALQ NSGVDLSQAS ISVQIELGKR ANSRSPIPKS  540
VVKDNEILSS NQGKRHSRVA SGEDSEHAPK KLKTGRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08130.21e-133bHLH family protein