PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g638100.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

SBP

Protein Properties

Length: 463aa MW: 50626.2 Da PI: 7.1551

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g638100.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.9	1.1e-41	81	156	2	77
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cqv gC++dls+ k+yh+rhkvCe+hsk+++v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk+q Pd.00g638100.m01 81 CQVYGCDKDLSSSKDYHKRHKVCEAHSKTAKVIVNGREQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQ 156 **************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MATPNLFSAE DVSSSKLSSS IVDSNSRDSS LIDLKLGRLA DNRDFHDSKF SEGHPILSSS 60 ESSTPPKRMR VSGSYSQTAY CQVYGCDKDL SSSKDYHKRH KVCEAHSKTA KVIVNGREQR 120 FCQQCSRFHL LAEFDDGKRS CRKRLAGHNE RRRKPQVGIH SGRAGRLLQS YNGSRFQDNM 180 LTTASFICQE ILPSGILDAE NYGTNDWCRH IKVEDATHYR PLSGVPVTNG HLPLKPVFPS 240 YDIGKRYPPF HDNGTNPLTG NIIIENGSQY SHDMRGLNSG SHSMFHETTT LGSEDFNVFN 300 TASTVHELSG ISDSGCALSL LSSQSQKSSS HLSGIPMARP PVMPVSHTNY RLVQSSENLI 360 GGCSHASSSG VSNKLPSSGM NSGAGTHLGP ILLSNGSDTD DFGISDGIFQ GSDFVNAKDC 420 LSCEDGTTID LLQLSSQLQR VEDQRQSMEV KQESDAFCCL RIT

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MATPNLFSAE DVSSSKLSSS IVDSNSRDSS LIDLKLGRLA DNRDFHDSKF SEGHPILSSS  60
ESSTPPKRMR VSGSYSQTAY CQVYGCDKDL SSSKDYHKRH KVCEAHSKTA KVIVNGREQR  120
FCQQCSRFHL LAEFDDGKRS CRKRLAGHNE RRRKPQVGIH SGRAGRLLQS YNGSRFQDNM  180
LTTASFICQE ILPSGILDAE NYGTNDWCRH IKVEDATHYR PLSGVPVTNG HLPLKPVFPS  240
YDIGKRYPPF HDNGTNPLTG NIIIENGSQY SHDMRGLNSG SHSMFHETTT LGSEDFNVFN  300
TASTVHELSG ISDSGCALSL LSSQSQKSSS HLSGIPMARP PVMPVSHTNY RLVQSSENLI  360
GGCSHASSSG VSNKLPSSGM NSGAGTHLGP ILLSNGSDTD DFGISDGIFQ GSDFVNAKDC  420
LSCEDGTTID LLQLSSQLQR VEDQRQSMEV KQESDAFCCL RIT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	1e-49	SBP family protein