PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g634780.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 656aa MW: 74436.8 Da PI: 8.0021

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g634780.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	51	4.8e-16	95	185	1	72
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...................tekerrtraetrtgCkaklkvkkek 72 +fY+eYAk+vGF ++++s++s+ +g++++++f C+++g+++e++++ +++ r +r+ ++t+Cka+++vk++ Pd.00g634780.m01 95 SFYREYAKSVGFAAVIKASRRSRVSGKFIDAKFACTRYGNKRESSTAevpesvsnsressicssvkRKRGRASRSWEKTDCKACMHVKRNF 185 5***************************************999999***********998888899**************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 656 aa Download sequence
MGIDLEQPSG EYHKEDNRPS VNNIVDGRGE ENHRAIVSVT NGPVNDKENA GQNVNGRVSD 60 TRNKTVTRDE INLNSSRDSE PRDGMEFESK EEAFSFYREY AKSVGFAAVI KASRRSRVSG 120 KFIDAKFACT RYGNKRESST AEVPESVSNS RESSICSSVK RKRGRASRSW EKTDCKACMH 180 VKRNFDLGTG DADGLHAIRR RTKKMYVNMA RQSGGYKKSD NQKDREQWIP TYMRDIFLAG 240 MSTTQRSESI NSFFDKYMQR KTTLKEFLEQ YKTILREKYE EEVKADFETW HKQPALRSPS 300 PFGKQMATMY THAIFKKFQV EVLGVVACHP KKETEDGAIK TFRVQDFEED QDFVVAWNEM 360 TSDISCFCHS FEFNGFLCRH VMIVLQMSGV HSIPSQYILK RWTKDAKNRQ TLREGSASVD 420 CRVKRYNDLC ERAFKLSDEG SLSQESYNIA FNALEEALRS CESINNSIQS VIEPISGETH 480 GSEGVNQGNS KNKTNKQNGA SKKGQVQSEP EVITIGVQES WQQVEQLVSR APTLDGYFGS 540 QQIVQGTGQP STIASSRDQY YSNQHMQGLG QLNSIAPIHD AHYIIQQRLH GVGQLHFRPQ 600 SIPSCFDIPD GLQDTDQSTQ CISKSGESGD ENSKSLEIYI HTHQQENSNR RNPRPF

Sequence ? help Back to Top

Protein Sequence Length: 656 aa Download sequence

MGIDLEQPSG EYHKEDNRPS VNNIVDGRGE ENHRAIVSVT NGPVNDKENA GQNVNGRVSD  60
TRNKTVTRDE INLNSSRDSE PRDGMEFESK EEAFSFYREY AKSVGFAAVI KASRRSRVSG  120
KFIDAKFACT RYGNKRESST AEVPESVSNS RESSICSSVK RKRGRASRSW EKTDCKACMH  180
VKRNFDLGTG DADGLHAIRR RTKKMYVNMA RQSGGYKKSD NQKDREQWIP TYMRDIFLAG  240
MSTTQRSESI NSFFDKYMQR KTTLKEFLEQ YKTILREKYE EEVKADFETW HKQPALRSPS  300
PFGKQMATMY THAIFKKFQV EVLGVVACHP KKETEDGAIK TFRVQDFEED QDFVVAWNEM  360
TSDISCFCHS FEFNGFLCRH VMIVLQMSGV HSIPSQYILK RWTKDAKNRQ TLREGSASVD  420
CRVKRYNDLC ERAFKLSDEG SLSQESYNIA FNALEEALRS CESINNSIQS VIEPISGETH  480
GSEGVNQGNS KNKTNKQNGA SKKGQVQSEP EVITIGVQES WQQVEQLVSR APTLDGYFGS  540
QQIVQGTGQP STIASSRDQY YSNQHMQGLG QLNSIAPIHD AHYIIQQRLH GVGQLHFRPQ  600
SIPSCFDIPD GLQDTDQSTQ CISKSGESGD ENSKSLEIYI HTHQQENSNR RNPRPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	1e-132	FAR1 family protein