PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g632680.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | GRAS | ||||||||
Protein Properties | Length: 776aa MW: 88046.1 Da PI: 5.8205 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 366.3 | 4.2e-112 | 399 | 773 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 l++lL+ cA+avss+d++ +++lL+++++++sp+gd qRla++f++AL+ar+a++ +++ + ++++ +++++l+a+++ ++P+ ++ Pd.00g632680.m01 399 LRNLLILCAQAVSSNDFRTTSELLKQVRQHSSPEGDGSQRLAHFFANALEARMAGTDTGTRMFYVSLASKRISVVDTLKAYQVHLSACPFKRI 491 6899***************************************************777777777777888788******************** PP GRAS 94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184 s + N++Il+ +e+++++Hi+Df+i +G+QWp L+q L++Rp+gpp+lRiTg++ p++g ++ +eetg+rLak++e+++vpfe+n+++++ Pd.00g632680.m01 492 SIFFKNKMILKMAEKATTLHIVDFGILYGFQWPILIQHLSKRPGGPPKLRITGIEVPQPGfrPADWIEETGRRLAKYCERFNVPFEYNAIASQ 584 ***********************************************************9*9****************************999 PP GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277 ++e+++le+L+++++E+laVn++l+ ++llde+v+++ +rd+vLkl+++++P+++v++ + ++n++ F++rf eal ++sal+d+++ +++r Pd.00g632680.m01 585 NWESIKLEDLKTERNEVLAVNCMLRFKNLLDETVEVNCPRDSVLKLIRRMKPDIFVHTIVNGSYNAPFFVTRFREALFHFSALYDAFDINIAR 677 ********************************************************************************************* PP GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370 ++eer k Ere+ gre++nv+aceg er+er et+++W+ r ++aG++p+pl++++ k k +r + + + ++++s+++++gWk+r +++ Pd.00g632680.m01 678 DNEERLKFEREFYGREAMNVIACEGLERVERPETYKQWQLRCTRAGLRPLPLDQDMLKIFKDKVRAWYHKDFVIDQDSDWMLQGWKGRIVYAS 770 ********************************************************************888********************** PP GRAS 371 SaW 373 S+W Pd.00g632680.m01 771 SCW 773 *** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 776 aa Download sequence |
MDPTINGVPD YTNGFNIDAE PFLPNSTQFP NLINEYQFNQ LSPDLNFLDN HFSLPSPDLE 60 PGNFVPSISV SSDGESFVPS TSLSPDGVSF APPVTTVSPG GDSSSDDNDY SETVFKFINQ 120 ILMEENIEKK PCMFYDPLGL RDTEKSFYDA LGQKYPSSSP NQQPLYIDQN VESPDDQKPF 180 LSQTSLPNDH TFQFNSHPNS QLSVPLTNDL TSVGDELHVD NALQGSSVNE FLAQNIFTDS 240 ESILQFNRGL EEASKFLPKD NQLVINLESN TTYPKVKRHA PTVIVKKEKS ERKKEKSERK 300 NSPNGSWGRK NHERGDVAPE EERSSKQSAV YIQESELSEM FDRVLLCTGG NNESPCDNVA 360 LQNEASQALQ PSGHPQESNG NGGKARAKKQ GKKKETVDLR NLLILCAQAV SSNDFRTTSE 420 LLKQVRQHSS PEGDGSQRLA HFFANALEAR MAGTDTGTRM FYVSLASKRI SVVDTLKAYQ 480 VHLSACPFKR ISIFFKNKMI LKMAEKATTL HIVDFGILYG FQWPILIQHL SKRPGGPPKL 540 RITGIEVPQP GFRPADWIEE TGRRLAKYCE RFNVPFEYNA IASQNWESIK LEDLKTERNE 600 VLAVNCMLRF KNLLDETVEV NCPRDSVLKL IRRMKPDIFV HTIVNGSYNA PFFVTRFREA 660 LFHFSALYDA FDINIARDNE ERLKFEREFY GREAMNVIAC EGLERVERPE TYKQWQLRCT 720 RAGLRPLPLD QDMLKIFKDK VRAWYHKDFV IDQDSDWMLQ GWKGRIVYAS SCWVPA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07530.1 | 0.0 | GRAS family protein |