PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g631950.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 439aa MW: 48823.7 Da PI: 6.9018 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.9 | 0.00021 | 291 | 332 | 9 | 55 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r RR+++ ++ L +llP + +K++ a++ e+A +Y+k Lq Pd.00g631950.m01 291 ARGRRQKLSDKTRCLEKLLPLD-----RKMDTATVFEEAYKYVKFLQ 332 599******************9.....8******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 439 aa Download sequence |
MEDSELVMLM RSLLAKAQEE INTTNTWEAV AEEVPTFTAM LSSAGVSLHP FLSTTAAHDD 60 PLDPNAMSSS SSLMPLPFSE FAQDTLITTT PTRSPTTTFN FTTAAEADYI QTQMQSPILR 120 LPKQEPISNY QDYFPIPSPS NTNVSTSPPF YHLHQQQYQF YNNPPDLNLE FTMHSASSAT 180 STPIHHPSPY DSMNDCSSIF HHLPDLLPLD PFNSPYSSSS SSSSYKRPRL FEPPHFQNLH 240 LSTPLPVFPP NNNTHNALLP SSSSSPYNIP AKPRTRKRGT PSPSPHASSL ARGRRQKLSD 300 KTRCLEKLLP LDRKMDTATV FEEAYKYVKF LQAQVTALQA MPVVTPNTSA AASATGYDDH 360 HLSPMSSRTT GGLERLSRNQ LLQVLLNSPV AQTFMYSQGC CVFSVEQLAK FNCSTSSRAL 420 NLLRHYYPHL FFDSHSPTN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 276 | 297 | RKRGTPSPSPHASSLARGRRQK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G22100.1 | 7e-25 | bHLH family protein |