PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g631950.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 439aa    MW: 48823.7 Da    PI: 6.9018
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g631950.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.90.00021291332955
                       HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        r RR+++ ++   L +llP +     +K++ a++ e+A +Y+k Lq
  Pd.00g631950.m01 291 ARGRRQKLSDKTRCLEKLLPLD-----RKMDTATVFEEAYKYVKFLQ 332
                       599******************9.....8******************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 439 aa     Download sequence    
MEDSELVMLM RSLLAKAQEE INTTNTWEAV AEEVPTFTAM LSSAGVSLHP FLSTTAAHDD  60
PLDPNAMSSS SSLMPLPFSE FAQDTLITTT PTRSPTTTFN FTTAAEADYI QTQMQSPILR  120
LPKQEPISNY QDYFPIPSPS NTNVSTSPPF YHLHQQQYQF YNNPPDLNLE FTMHSASSAT  180
STPIHHPSPY DSMNDCSSIF HHLPDLLPLD PFNSPYSSSS SSSSYKRPRL FEPPHFQNLH  240
LSTPLPVFPP NNNTHNALLP SSSSSPYNIP AKPRTRKRGT PSPSPHASSL ARGRRQKLSD  300
KTRCLEKLLP LDRKMDTATV FEEAYKYVKF LQAQVTALQA MPVVTPNTSA AASATGYDDH  360
HLSPMSSRTT GGLERLSRNQ LLQVLLNSPV AQTFMYSQGC CVFSVEQLAK FNCSTSSRAL  420
NLLRHYYPHL FFDSHSPTN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1276297RKRGTPSPSPHASSLARGRRQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22100.17e-25bHLH family protein