PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g631080.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 269aa    MW: 30007.9 Da    PI: 8.357
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g631080.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2643.1e-20131180255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                        y+GVr+++ +g+W+AeIrdp+    r +r++lg+f taeeAa+a+++a+ +++g
  Pd.00g631080.m01 131 NYRGVRQRP-WGKWAAEIRDPR----RaTRVWLGTFMTAEEAARAYDKAAIEFRG 180
                       59*******.**********82....48************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MRSSYKRPKL NDPEPIHPAE PPMQLQPRRL TQDQELTVIV SALRNVVAGT TTAASMDFNS  60
LLPPLQCAST SYAGATGSSC YSDALLTQSD LDTCNVCKIK GCLGCNFFPP PAQEEKGNNN  120
KKGPKKRVKK NYRGVRQRPW GKWAAEIRDP RRATRVWLGT FMTAEEAARA YDKAAIEFRG  180
ARAKLNFPFP DTTLLTQETN SAQPAQPQQV VTEQVTSSEF SREIEMAEIG KGKEKEKEFL  240
ETIGEEEIQQ WMRMMDFATD HSSGNAQSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.12e-35ERF family protein