PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g630150.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 354aa MW: 40159 Da PI: 4.2927 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36.7 | 7.8e-12 | 188 | 231 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+r+N++++ Lr+++Pk + K++ +iL +++Y+k+L Pd.00g630150.m01 188 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 231 589*********************66......****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 354 aa Download sequence |
MELSEHSFLE ELLALRRDST WETIPTEMNE FLSSSGSWGN FGYLDQNPPT FFPNSSCTQE 60 FSPPFEPNLS NCYNNNNTTF NEVYYPLGFG AGEDGLSAQQ QLTDSSYNTL DTPPFPVQED 120 NPWSMLEEEE LGLLGDEIHN LETQAEAACK MEPIQSPDQV PVFNMGMCEE RNNRGNSKKL 180 QGQPSKNLMA ERRRRKRLND RLSMLRSIVP KISKMDRTSI LGDTIDYMKE LLERINNLQQ 240 EIETDADQLN VMSIFKDVKP NEMLVRNSPK FDVQRRNVDT RIDICCAGKP GLLLSTVSTL 300 EALGLEIQQC VISCFNDFAM QASCSEDFDQ RTTVTSEDIK QALFRNAGYG GRCL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 191 | 198 | ERRRRKRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65640.1 | 1e-89 | bHLH family protein |