PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g628890.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 239aa MW: 25930 Da PI: 9.5598 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.1 | 1.1e-18 | 108 | 158 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +g+WvAeIr p + r r +lg+f ta eAa a+++a+++++g Pd.00g628890.m01 108 CNYRGVRQRT-WGKWVAEIRAP---N-RgSRLWLGTFPTAIEAALAYDEAARAMYG 158 56*****999.**********8...3.35************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MKKLKKIKSE LKITIHLGAN WGGGPGAKEG GSLYFLFSTK VNCMTKLVKT DPRQDGSNPV 60 AETLAKWKAY NDHLDSCNDE SKPIRRVPAK GSKKGCMKGK GGPENSRCNY RGVRQRTWGK 120 WVAEIRAPNR GSRLWLGTFP TAIEAALAYD EAARAMYGSA ARLNFPNISI SSLSKDPSSR 180 ATLSAPSLLA TSAGSESSGR SDHSEDCAAQ GKVNYLSPNV ENEDTTTNRD QTNEDGEDE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05410.2 | 3e-33 | ERF family protein |