PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g628830.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 444aa    MW: 49321.3 Da    PI: 5.4465
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g628830.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS292.79.6e-90454302373
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl..fsevsPilk 92 
                       ++lLl+cA a++s+d +laq++++ l++ as+ gdp+qRl++ +++AL +r ++ +++ ++ ++ s++s++  ++ +++++l  ++++ P+++
  Pd.00g628830.m01  45 EKLLLHCASALESNDVTLAQQVMWVLNNVASSVGDPNQRLTSWILRALISRASKVCPTPMN-FNGSTSSSTIPTRLMSVTELagYVDLIPWHR 136
                       689***************************************************8777775.5555555445666666666689********* PP

              GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvlv 182
                       f++ + N+aI +a++g+ +vHi+Df+i++++QWp+L++aLa+Rpegpp lR+T+ +   ++    + + ee+g rL++f +  +vpfefnv+ 
  Pd.00g628830.m01 137 FGYCASNSAIFKAIQGCPKVHILDFSITHCMQWPTLIDALAKRPEGPPLLRVTVPNWRPQVpplLNVSSEEVGLRLRNFSRFKDVPFEFNVIE 229
                       *****************************************************998755558899999***********************94 PP

              GRAS 183 ak.rledl.....eleeLrvkpgEalaVnlvlqlhrlldesvsles......erdevLklvkslsPkvvvvveqeadhnsesFlerflealey 263
                        + +le l     ++++L+++ +E+l+Vn++  l +l de+ + +        r+++L++++sl+P+++vvv++++d++++s+  r++ +++y
  Pd.00g628830.m01 230 NSsSLELLlstqlNPSSLDLRDDEVLVVNCQNWLRYLSDEPRCGSPghqdgsMRNTFLNMIRSLNPRIIVVVDEDSDLSAPSLSSRITTCFNY 322
                       4436665556666999**********************66544332223334677************************************** PP

              GRAS 264 ysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesg 356
                       ++  fdsle+ lp++s +r+ +E   +g +i+n++  eg +r+e+ et    ++r++++GF ++p+ e+++k++k ll +++  g+ ++ e++
  Pd.00g628830.m01 323 MWIPFDSLETFLPKDSTQRMDYESD-VGHKIENIIGFEGHQRIEKLETGVAMSQRIRNVGFLSAPFCEETVKEVKGLLDEHA-SGWGMKREED 413
                       *************************.********************************************************.889999999* PP

              GRAS 357 slvlgWkdrpLvsvSaW 373
                        lvl+Wk+++ v+++aW
  Pd.00g628830.m01 414 MLVLTWKGHNSVFATAW 430
                       ***************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 444 aa     Download sequence    
MKTEVRGSTT SISLQNPTTI FNTSQGASLT ALTGCLGSLD GACIEKLLLH CASALESNDV  60
TLAQQVMWVL NNVASSVGDP NQRLTSWILR ALISRASKVC PTPMNFNGST SSSTIPTRLM  120
SVTELAGYVD LIPWHRFGYC ASNSAIFKAI QGCPKVHILD FSITHCMQWP TLIDALAKRP  180
EGPPLLRVTV PNWRPQVPPL LNVSSEEVGL RLRNFSRFKD VPFEFNVIEN SSSLELLLST  240
QLNPSSLDLR DDEVLVVNCQ NWLRYLSDEP RCGSPGHQDG SMRNTFLNMI RSLNPRIIVV  300
VDEDSDLSAP SLSSRITTCF NYMWIPFDSL ETFLPKDSTQ RMDYESDVGH KIENIIGFEG  360
HQRIEKLETG VAMSQRIRNV GFLSAPFCEE TVKEVKGLLD EHASGWGMKR EEDMLVLTWK  420
GHNSVFATAW VANGPNPNGL LMED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-120GRAS family protein