PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g628680.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 249aa MW: 26453.8 Da PI: 8.9076 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 16.2 | 1.9e-05 | 167 | 205 | 8 | 49 |
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAve 49 r + RR+r+N++f eL ++l + + +K +K ++L+ A e Pd.00g628680.m01 167 RGKLRRNRLNERFLELVSVLDPG---RLPKTDKGATLTDAAE 205 6689*****************98...89**********9976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MCYVGKATKI FIFVVTVLVV LGLVLGFGVL RHGLQKTHKC SADSDSCNSL SSPPLIFPNP 60 NSTSADLNFK PTSSTDLNSN PTSSGDPNSN PTSARPNSQS AIFSASAGFN GCAAVQSTKA 120 GSGSVASVVH CVEADCSSGD SDNLMEVGSQ KRLRSESYGA SFSKACRGKL RRNRLNERFL 180 ELVSVLDPGR LPKTDKGATL TDAAEKSELR DEKRRQRVEK EKLEQQVIAM STQNGILPHS 240 PAISTAFAV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 3e-20 | bHLH family protein |