PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g627990.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 498aa MW: 54269.6 Da PI: 6.3593

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g627990.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.4	9.6e-31	269	327	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ Pd.00g627990.m01 269 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTILITTYEGNHNHP 327 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
MGPAPVIDER DFFADNKSHV DQGKSASAAP ADKMDLHGPT DMEFNVNTGL NLLLTNTSSD 60 QSVVDDGISS NIEDKRAKSE LAVLQAELER MNAENQRLRG MLNQVTTDFN ALQVHLLTLM 120 QSQKAEQNSS AAEGHGVFDG NNKMVVEEKK LINGNGSPAV VPRQFMDLGL AANNADTDEP 180 SQSSSEERSR ERSGSLGENV KVAGHSDDQE KKEFGRGIGK EESPDQPSQS WGPNKVPRLN 240 SPKEVDQTEA TMRKARVSVR ARSEAPMITD GCQWRKYGQK MAKGNPCPRA YYRCTMAAGC 300 PVRKQVQRCA EDRTILITTY EGNHNHPLPP AAMTMASTTS SAARMLLSGS MPSADGLMDS 360 NFLTRTILPC SSSMATISAS APFPTVTLDL TQSPNPLQLQ RPPGQFNIPF PNPSQNFTNG 420 PVSLLPQIFG QALYNQSKFS GLQMSQDMER AQLGHQQQPG HQGQQQNSLA DSVVRAAQES 480 SIFYEVQVLK PKSHQLGQ

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

MGPAPVIDER DFFADNKSHV DQGKSASAAP ADKMDLHGPT DMEFNVNTGL NLLLTNTSSD  60
QSVVDDGISS NIEDKRAKSE LAVLQAELER MNAENQRLRG MLNQVTTDFN ALQVHLLTLM  120
QSQKAEQNSS AAEGHGVFDG NNKMVVEEKK LINGNGSPAV VPRQFMDLGL AANNADTDEP  180
SQSSSEERSR ERSGSLGENV KVAGHSDDQE KKEFGRGIGK EESPDQPSQS WGPNKVPRLN  240
SPKEVDQTEA TMRKARVSVR ARSEAPMITD GCQWRKYGQK MAKGNPCPRA YYRCTMAAGC  300
PVRKQVQRCA EDRTILITTY EGNHNHPLPP AAMTMASTTS SAARMLLSGS MPSADGLMDS  360
NFLTRTILPC SSSMATISAS APFPTVTLDL TQSPNPLQLQ RPPGQFNIPF PNPSQNFTNG  420
PVSLLPQIFG QALYNQSKFS GLQMSQDMER AQLGHQQQPG HQGQQQNSLA DSVVRAAQES  480
SIFYEVQVLK PKSHQLGQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-116	WRKY family protein