PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g627450.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 255aa    MW: 27775 Da    PI: 5.543
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g627450.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.25.5e-2055103355
               AP2   3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       ++GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a++aa+++l+g
  Pd.00g627450.m02  55 FRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDAAARSLRG 103
                       8*******.**********883....5*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MAKPYAHMSS AGHAEALVTW EGLCFASLIH EAGIVLEGDS LAVVNAPTAG QEIRFRGVRK  60
RPWGRFAAEI RDPWKKTRVW LGTFDSAEDA ARAYDAAARS LRGPKAKTNF PPPTSAADYD  120
INKNHRLPPH HPSLYDDDTV CDVVQASRPT SSSLSSTVES FSGPRPQPRP TSDAQLQRRP  180
VHPVPPDDCH SDCDSSSSVV DDGDDCVLTS SFRRVSPLPF DLNLPPPPMM DGLDLFKSGE  240
VYGDDHDLQA TALCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.13e-25ERF family protein