PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g627450.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 194aa MW: 21308.6 Da PI: 4.8568 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 44.9 | 2.8e-14 | 4 | 42 | 14 | 55 |
AP2 14 rWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 r++AeIrd ++ ++r++lg+f++ae+Aa+a++aa+++l+g Pd.00g627450.m01 4 RFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDAAARSLRG 42 789*****883....5*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence |
MVFRFAAEIR DPWKKTRVWL GTFDSAEDAA RAYDAAARSL RGPKAKTNFP PPTSAADYDI 60 NKNHRLPPHH PSLYDDDTVC DVVQASRPTS SSLSSTVESF SGPRPQPRPT SDAQLQRRPV 120 HPVPPDDCHS DCDSSSSVVD DGDDCVLTSS FRRVSPLPFD LNLPPPPMMD GLDLFKSGEV 180 YGDDHDLQAT ALCL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50640.1 | 3e-15 | ERF family protein |