PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g626970.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 486aa MW: 52771.1 Da PI: 6.553

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g626970.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	92.1	4.3e-29	113	170	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +Dgy+WrKYGqK vkg+ + rsYYrCt+++Cpvk++ver++ ++++++++Y geH+h+k Pd.00g626970.m01 113 EDGYHWRKYGQKLVKGNAYVRSYYRCTHPKCPVKRQVERTH-NGQITDTVYFGEHQHPK 170 8*************************************9.*************85 PP
2	WRKY	103.5	1.2e-32	282	340	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK vkg+++prsYYrC+ +gCpvkk+ver+++d kvv+ tYeg+H+h+ Pd.00g626970.m01 282 VNDGYRWRKYGQKLVKGNPNPRSYYRCSNPGCPVKKHVERASHDSKVVIATYEGQHDHD 340 58********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 486 aa Download sequence
MISLGEPGTD KIASDTVPKK ESSNSEIHAP HQTPDNGIYP LQSDHRGNVQ SLIPGKSLQL 60 PDGVGTASQS NQEGSVTSLT SEKAPQTPET SAVVLRSGQE GSSPSTARER GLEDGYHWRK 120 YGQKLVKGNA YVRSYYRCTH PKCPVKRQVE RTHNGQITDT VYFGEHQHPK AQVNVPVAVS 180 FLVSIVEERP EELLLTGVEG KSSDVHGHTS NQIEPVDPSQ LSTVADNEGV QRVLSQSNRT 240 RDGDPDSKRQ KKEKHNGNSI PVDKPAGEPR VVVQTMSEAD IVNDGYRWRK YGQKLVKGNP 300 NPRSYYRCSN PGCPVKKHVE RASHDSKVVI ATYEGQHDHD VPPTRTVTHN AAASNVITTA 360 RNGESGTTSE GNAVCHDTSP EHEDKPNKQL NVEPRTKSSD VAGCDMVVDS DLGPERKLNE 420 QVVGKACTTE ESDAPAIIVP RANELQNGES GIKSEGNNAC IDTVVHGNLC PESNSPEQKN 480 PKAEPV

Sequence ? help Back to Top

Protein Sequence Length: 486 aa Download sequence

MISLGEPGTD KIASDTVPKK ESSNSEIHAP HQTPDNGIYP LQSDHRGNVQ SLIPGKSLQL  60
PDGVGTASQS NQEGSVTSLT SEKAPQTPET SAVVLRSGQE GSSPSTARER GLEDGYHWRK  120
YGQKLVKGNA YVRSYYRCTH PKCPVKRQVE RTHNGQITDT VYFGEHQHPK AQVNVPVAVS  180
FLVSIVEERP EELLLTGVEG KSSDVHGHTS NQIEPVDPSQ LSTVADNEGV QRVLSQSNRT  240
RDGDPDSKRQ KKEKHNGNSI PVDKPAGEPR VVVQTMSEAD IVNDGYRWRK YGQKLVKGNP  300
NPRSYYRCSN PGCPVKKHVE RASHDSKVVI ATYEGQHDHD VPPTRTVTHN AAASNVITTA  360
RNGESGTTSE GNAVCHDTSP EHEDKPNKQL NVEPRTKSSD VAGCDMVVDS DLGPERKLNE  420
QVVGKACTTE ESDAPAIIVP RANELQNGES GIKSEGNNAC IDTVVHGNLC PESNSPEQKN  480
PKAEPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G04880.2	2e-90	WRKY family protein