PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g624890.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 513aa    MW: 56059.5 Da    PI: 6.6978
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g624890.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH51.71.6e-16351397455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        hn  ErrRRdriN+++  L+el+P++      K +Ka++L +A+eY+ksLq
  Pd.00g624890.m01 351 VHNLSERRRRDRINEKMRALQELIPHS-----NKTDKASMLDEAIEYLKSLQ 397
                       6*************************7.....5******************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 513 aa     Download sequence    
MNSCIPDWNF EADLPLTNQK KPMGPDHELV ELLWRNGQVV LHSQTHRKPS PNPPNEARQV  60
QKQDQQTIRV GGLYGNSSNL TQDEGTGSLI HYPLEDSFDK EFCSHFFSEL PSCDPIEIDK  120
PTKQFEEEKF AKFGASDTPH LVSSAPQPNV KSPAGMGYPA NPMPPPRYQY NNSTEQNQNL  180
GGLAKVVNFS TFATPGKGDR GSSRGTIGGK ESGNLTQGEV KECSVMTVGS SYVGSNQVLN  240
DLDVSRASSN CDGTTGLSVG PFYDNVQKMM PHSETGKTDT LDPTLTSSSG GSGSSFGRGG  300
KRSNVVNSNK RKGRDAEDSE CQSEAAELES AAGNKSAQRS GSSRRSRAAE VHNLSERRRR  360
DRINEKMRAL QELIPHSNKT DKASMLDEAI EYLKSLQMQL QVMWMGSGMA PMIVPLVDQC  420
MNVAPATNQA VMCQAPVLNP VDYHNQMQNP AFQEQYARLM GFHHMQTMSQ PMNMFRFGSQ  480
PMQQNQMIAP TGINSGHLGG GVTANDTLSG KMC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1356361ERRRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43010.26e-53bHLH family protein