PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g624890.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 513aa MW: 56059.5 Da PI: 6.6978 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 51.7 | 1.6e-16 | 351 | 397 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K +Ka++L +A+eY+ksLq Pd.00g624890.m01 351 VHNLSERRRRDRINEKMRALQELIPHS-----NKTDKASMLDEAIEYLKSLQ 397 6*************************7.....5******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 513 aa Download sequence |
MNSCIPDWNF EADLPLTNQK KPMGPDHELV ELLWRNGQVV LHSQTHRKPS PNPPNEARQV 60 QKQDQQTIRV GGLYGNSSNL TQDEGTGSLI HYPLEDSFDK EFCSHFFSEL PSCDPIEIDK 120 PTKQFEEEKF AKFGASDTPH LVSSAPQPNV KSPAGMGYPA NPMPPPRYQY NNSTEQNQNL 180 GGLAKVVNFS TFATPGKGDR GSSRGTIGGK ESGNLTQGEV KECSVMTVGS SYVGSNQVLN 240 DLDVSRASSN CDGTTGLSVG PFYDNVQKMM PHSETGKTDT LDPTLTSSSG GSGSSFGRGG 300 KRSNVVNSNK RKGRDAEDSE CQSEAAELES AAGNKSAQRS GSSRRSRAAE VHNLSERRRR 360 DRINEKMRAL QELIPHSNKT DKASMLDEAI EYLKSLQMQL QVMWMGSGMA PMIVPLVDQC 420 MNVAPATNQA VMCQAPVLNP VDYHNQMQNP AFQEQYARLM GFHHMQTMSQ PMNMFRFGSQ 480 PMQQNQMIAP TGINSGHLGG GVTANDTLSG KMC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 356 | 361 | ERRRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43010.2 | 6e-53 | bHLH family protein |