PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g624280.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 408aa MW: 46084.4 Da PI: 8.5311 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 105.8 | 2.3e-33 | 195 | 252 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s++prsYYrCt+++C vkk+vers +dp++v++tYeg+Hnh+ Pd.00g624280.m01 195 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCVVKKRVERSFQDPSIVITTYEGQHNHQ 252 8********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 408 aa Download sequence |
MSNEKKNPYQ YDPFDYNPHE INRSSFPFFN YGTPSIQDPQ NLHGFESDHP NSSFMSFTDC 60 LHGSMDYNTL SRAFDMSCSS SEVISPQLDH ENSKNLQAAA AAGVGDHSVG TSTTENPSTP 120 NSSVSSSSSE AAGSHEHEDS EKKKKEKQPK VAVCDEAARD EEDKSKKGSK AKKKEKRQRE 180 PRFAFLTKSE VDHLEDGYRW RKYGQKAVKN SPYPRSYYRC TTQKCVVKKR VERSFQDPSI 240 VITTYEGQHN HQCPATLRGN LNLNAVGMLS PNSLLTSASL NGSARFQHEF LTQFLPMNNQ 300 LQLQLQSHHH QDDHQANLLL YLGKGQILFY TNSSPSYREF HKIFFKPVTS ALSQAVYVTS 360 SRAIMWWTIG VLPCPHLMMA LRVLLGSGVG RVACHEQSES YLVKERVR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 142 | 172 | KKKKEKQPKVAVCDEAARDEEDKSKKGSKAK |
2 | 142 | 176 | KKKKEKQPKVAVCDEAARDEEDKSKKGSKAKKKEK |
3 | 174 | 179 | KEKRQR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18170.1 | 1e-48 | WRKY family protein |