PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g624280.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 408aa    MW: 46084.4 Da    PI: 8.5311
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g624280.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY105.82.3e-33195252259
                       --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       +Dgy+WrKYGqK vk+s++prsYYrCt+++C vkk+vers +dp++v++tYeg+Hnh+
  Pd.00g624280.m01 195 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCVVKKRVERSFQDPSIVITTYEGQHNHQ 252
                       8********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    
MSNEKKNPYQ YDPFDYNPHE INRSSFPFFN YGTPSIQDPQ NLHGFESDHP NSSFMSFTDC  60
LHGSMDYNTL SRAFDMSCSS SEVISPQLDH ENSKNLQAAA AAGVGDHSVG TSTTENPSTP  120
NSSVSSSSSE AAGSHEHEDS EKKKKEKQPK VAVCDEAARD EEDKSKKGSK AKKKEKRQRE  180
PRFAFLTKSE VDHLEDGYRW RKYGQKAVKN SPYPRSYYRC TTQKCVVKKR VERSFQDPSI  240
VITTYEGQHN HQCPATLRGN LNLNAVGMLS PNSLLTSASL NGSARFQHEF LTQFLPMNNQ  300
LQLQLQSHHH QDDHQANLLL YLGKGQILFY TNSSPSYREF HKIFFKPVTS ALSQAVYVTS  360
SRAIMWWTIG VLPCPHLMMA LRVLLGSGVG RVACHEQSES YLVKERVR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1142172KKKKEKQPKVAVCDEAARDEEDKSKKGSKAK
2142176KKKKEKQPKVAVCDEAARDEEDKSKKGSKAKKKEK
3174179KEKRQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18170.11e-48WRKY family protein